Quercus lobata (valley oak): 115972437
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Entry
115972437 CDS
T07350
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115972437
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115972437
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
115972437
NCBI-ProteinID:
XP_030948585
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Position
12:complement(27890505..27893943)
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AA seq
408 aa
AA seq
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MTIAGRFEVRAILVLGLAFSCCVAESTLRRGLVGAAGPTDFNVNSYGAKADGKTDNVEAF
MKAWVAACKSGGGSARLVFPKGTYVTGPLVFAGPCKASKITVEVQGTIKATTDISEYTSP
EWILFESIKGLTLTGGIFDGRGETVWKYNDCHQNSDCQLLPTSIKFSKLTNTVVHGITSL
NSKSFHTHVYMCQNFKAYDLTITAPSNSPNTDGMHISLSDLVNVSNSVIGTGDDCISIGQ
GVTNLGVTKITCGPGHGISVGSLGKYDDEKDVSGVVVSNCTLRDTTNGVRIKTYSGSPPS
KASGITFQDIIMDAVKNPIIVDQKYGSHKSAASKVQISGVHYKNIVGTSTSDVAVSLLCS
SQVPCDVELVDIDLKFQGSSTNKAKSASSSCLNAKVKTGGKLNPPACR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgcaggaagatttgaagtaagagccattcttgttctaggcttagcattttcc
tgttgtgtggccgaatctacactccgtcgtggccttgtcggtgctgctggtcctacagat
ttcaatgttaactcttatggtgctaaggctgatggcaagaccgataatgtagaggcattt
atgaaagcgtgggttgctgcatgtaaatctggtggtggttcggcaaggcttgtctttccc
aaagggacgtatgtgacagggcctctcgtgtttgcagggccatgcaaggcctcaaaaata
actgttgaagttcagggaactattaaagctacaactgatattagtgaatatacctctcct
gagtggattttgttcgaatcgatcaaaggtttgacacttaccggtggtatttttgatggt
cgaggtgagactgtctggaagtacaatgactgtcatcagaattccgattgccaactcctc
ccaacttcaatcaaattttccaaactgaccaataccgtagttcatgggatcacttctcta
aatagcaaatcgttccacacgcatgtttatatgtgccaaaactttaaagcctacgatctc
actataactgctccatctaatagcccgaacaccgatggcatgcatataagcttgtccgat
ctcgtcaatgtatcaaacagcgtaattggaactggtgatgattgcatttctattggacaa
ggggttaccaatctcggtgtcactaaaataacctgtggcccaggacacggcataagtgtt
ggcagccttggcaagtatgatgatgagaaagatgtgagtggggttgttgtgagtaattgc
acattaagagacacaacaaatggtgtgaggatcaaaacctattcagggtcacctccaagc
aaagcttcaggcatcacttttcaagatataattatggatgcggttaaaaatcctatcatc
gttgatcagaaatatggttcacataagagtgcggcatccaaagtgcagattagcggcgtt
cattacaagaacattgttggcacctcgacttcagatgttgcagtgtcattactatgcagt
tcacaagtgccttgtgatgttgaattggtggacattgatttgaagttccagggcagtagt
actaacaaagcaaaatcagcttcatcctcatgcttgaatgcaaaggttaagaccggaggc
aaactgaatccaccggcttgtcgatag
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