Quercus lobata (valley oak): 115972461
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Entry
115972461 CDS
T07350
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03020
RNA polymerase
qlo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115972461
09124 Replication and repair
03420 Nucleotide excision repair
115972461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115972461
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115972461
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115972461
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
115972461
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115972461
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115972461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Vg_Tdu
Motif
Other DBs
NCBI-GeneID:
115972461
NCBI-ProteinID:
XP_030948616
UniProt:
A0A7N2N2J7
LinkDB
All DBs
Position
12:9536300..9540791
Genome browser
AA seq
176 aa
AA seq
DB search
MFFHIVLERNMQLHPRHFGRNLRDNIVAKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR
DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPAAA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgttcttccacatagtactggagcggaacatgcagctccaccctcgccacttcggccgc
aacctccgtgacaacattgtcgccaagctcatgaaagatgtcgagggcacctgcagtggt
cgacatgggtttgtagtggcaataactggaatagagaatattgggaaggggttgattcgt
gatggaactggatttgtgtcctttccagtgaagtaccaatgtgttgttttcagacccttt
aaaggcgagattttagaggctgttgttactatggtcaacaagatgggattttttgctgaa
gctgggcctgttcaaatttttgtttcaaaccatttgataccggatgatatggaattccaa
tctggagatatgccaaattatacaacttcagatggatcagttaagatacaaaaggatagt
gaagtccggctgaagataattggaactcgagttgatgctacagaaattttctgcattggt
accataaaagatgatttcttgggtgtgatcaatgatcctgcagcggcttag
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