Quercus lobata (valley oak): 115972469
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Entry
115972469 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115972469
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115972469
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115972469
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
115972469
NCBI-ProteinID:
XP_030948630
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Position
12:complement(39662490..39673320)
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AA seq
622 aa
AA seq
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MDNGILQVTLSNPGGMVTGIQYHGIDNLLEVRNSETDRGYYDMVWNNYRSKGTEGNLDRL
EGTKMEVVVKNEEQVELSFTRMWDPSLKGNFVPLNIDKRFVMLRGSSGFYSYAIYERLAN
WPAFSMDTTRIALKLRKDKFNYMAIADNIQRFMPLPEDRLPPRGQALAYPEAVRLVNPVE
PEFKGEVDDKYEYSDDAKDTQVHGWVSANPPVGCWQITPSYEFRSAGPFKQSLTSHNGPT
SLSVFHSPHYAGEDLVTDFGPNEPWKKVYGPVFIYLNSLTNGKGPSLLWENAKKQTINEV
KAWPYDFPASVDFPSSNQRGSVTGRLLVLDRYINKNVVPGNGSYVGLALPGDVGSWQREC
KGYQFWTIANKDGYFSINNVRAGEYNLYAWVPGVIGDYKNVAVITITSGRSADVGNLVYE
PPRDGPTLWEIGIPDRTAAEFYVPDPNLLYINKLYVNQPDCRFRQYGLWERYAEIYPDKD
LVYTIGVSDYTKDWFYAQVTRKIANKVYQGTTWQIKFNLHNVNRIATYKLRVALASAALS
ELQVRVNNPKTKQPLFSSGLIGDDNAIARHGIHGLYWLYTVDIPGGQLVEGDNTVFLTQP
RSVSPFQGIMYDYIRLEGPPGT
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggataatggcatactacaagtcaccctatcaaatccaggaggaatggtcactgggata
caatatcatggcattgataatttgctcgaagttcgtaacagcgaaactgatagaggatac
tatgatatggtatggaacaactacagaagtaagggaaccgagggtaaccttgataggttg
gaagggacaaaaatggaggtagttgtgaaaaatgaagaacaagtagagctgtccttcact
agaatgtgggatccctcacttaagggcaactttgttccattgaacatagacaaaaggttc
gtgatgcttcgtggttcctcaggattctactcctatgccatttatgaacgcttagcaaat
tggcctgctttcagcatggacactactaggattgcattgaagcttaggaaagacaagttt
aattatatggctatagcagacaacatacaaagattcatgcccttgcctgaagaccggtta
ccacctagaggccaagccctggcctacccagaagcagtacgacttgtcaatcctgtagag
ccagagtttaaaggagaggtggatgacaagtacgaatactcagacgatgccaaggatacc
caagttcatgggtgggtaagcgcaaacccacccgtggggtgttggcaaatcacacccagc
tacgagttccgatctgctggacccttcaaacaatcccttacctcccataacggtcccacc
agcctttcagtatttcatagcccacactacgcaggagaggatttggtaacagattttgga
cctaatgagccatggaagaaagtttacggtcccgtttttatttatcttaattctttgact
aatggcaagggccccagtttgctttgggagaatgctaaaaaacagacgatcaatgaagtt
aaagcctggccttatgattttccagcttcagtggactttccatcatcaaatcaacggggt
agtgtcactggtcgattactggtccttgataggtatattaataagaatgttgtacctgga
aatggttcttatgttggattggcactcccaggggatgttggatcttggcaaagagaatgc
aagggttaccaattctggaccatagctaataaggatggctatttcagtattaataatgta
cgtgctggtgaatataatttgtatgcatgggtccctggtgtcatcggtgattacaaaaat
gttgctgtcattaccataacatcaggtcgtagcgctgatgttggtaatcttgtttatgag
cctccaagagatggcccaacattgtgggaaataggcatcccagatcgcactgctgcagaa
ttctatgttcccgaccctaaccttttgtatattaacaaactttatgtcaatcaacctgac
tgcaggtttagacagtacggtttgtgggaaagatatgcagaaatctatcctgataaagac
ttagtttacaccataggtgtgagtgattacactaaagattggttctatgctcaggttacc
aggaaaatagccaataaggtgtatcaaggaactacatggcaaatcaaatttaatcttcac
aatgtgaatcgtattgctacttataagttacgagtggcactggcatctgctgctctttct
gaattacaggttcgggtgaacaatccaaaaacaaaacaacctctgttttcaagtggatta
ataggggatgacaacgccattgctagacatggaatccatgggctctattggctttacact
gtggacatcccaggtggtcagcttgttgaaggggataatactgtttttttgacacaacca
agaagcgtcagccctttccaagggattatgtatgattatatccgtttagaaggtccccca
gggacataa
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