Quercus lobata (valley oak): 115972519
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Entry
115972519 CDS
T07350
Name
(RefSeq) F-box protein SKP2A-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115972519
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115972519
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box_5
LRR_At5g56370
LRR_14
F-box-like
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
115972519
NCBI-ProteinID:
XP_030948692
UniProt:
A0A7N2N6L2
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Position
12:41347475..41348642
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AA seq
358 aa
AA seq
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MSMSSLCDDELGLILERVHDPCDRKSVSLVCKQWLRVEGLTRLSIRVFELDSLRRFLPRY
PNIVTFECSTLINDDELKFLAKTCPKLEVLNLSLERPFHDEFTTVFDNVYDDGLCALGNG
CHKLSKVLLRRRICWTVVSLVKLAQNLTIMDLAKCCLVTDQDLEAIGALNSITILNLEGC
SITDVGLVSLATGASSRSLKKLVLEGCYQITDYGVSSLRQMCCLEELNMADCGTKVSNIG
CVELAAIQTLKRLNLSWLSNVSDPTLLALAENCRNLKQVDLTGCELITGAGIRAFANHGC
VQALVLSYCRNIFAYDLEHLALGCRSLKYVVLDRGWKAAMPMKMVENISRFCDIICRL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcatcattgtgtgatgatgaactaggcttaatactcgagcgggtccatgac
ccatgtgacagaaagtcggtctctttagtttgcaagcaatggctgagagtggagggtctt
acccgcttatccatacgggttttcgaactcgattcccttcgtcggttcctacccagatac
ccaaatatagtcacatttgaatgttcaacactaatcaatgatgatgagcttaaattcttg
gccaaaacatgtcccaagctcgaggtccttaaccttagtttagaacgcccattccacgac
gagtttacaactgtttttgataatgtttacgacgatggtttatgtgctttaggaaatggg
tgtcacaaattgtcgaaagttttactaaggaggagaatttgctggactgttgtttcgctt
gttaagttggcgcaaaatttgacaattatggatttggcaaagtgctgtttagttacagat
caagaccttgaagctattggggcattgaattctattactattttgaatttggaaggctgt
tcaattacagatgttggattggtttctttggcaacaggggcttcatcgaggtctttgaaa
aagttggttctcgagggatgttatcaaattacagattatggggtgtcaagtttgagacaa
atgtgttgcttggaggagcttaacatggcagattgtggcacgaaagtttcgaatattgga
tgtgtggaacttgctgcaattcaaactctcaagagactaaatttgtcgtggttgtcaaat
gtatcagatcctacacttttagcactagctgagaactgccggaatttgaagcaggttgat
ttaacaggttgtgagttaattactggagctggaattcgtgcttttgcaaatcatgggtgt
gtacaagctcttgtgttgagttattgtcgcaatatttttgcttatgatttggaacattta
gcacttggatgccgctcattaaagtatgttgtgctggatagaggatggaaagcggcgatg
cctatgaagatggtagagaatattagcaggttctgtgacataatttgtaggctttaa
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