KEGG   Quercus lobata (valley oak): 115972560
Entry
115972560         CDS       T07350                                 
Name
(RefSeq) histone H2AX-like
  KO
K11251  histone H2A
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115972560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qlo03036]
    115972560
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:qlo04147]
    115972560
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    115972560
Exosome [BR:qlo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115972560
SSDB
Motif
Pfam: Histone_H2A_C Histone CBFD_NFYB_HMF Cdc6_lid
Other DBs
NCBI-GeneID: 115972560
NCBI-ProteinID: XP_030948744
UniProt: A0A7N2N486
LinkDB
Position
12:23417656..23418728
AA seq 140 aa
MSSTGASTKGGRGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQN
LLPKKIGKGKGDIGSASQEF
NT seq 423 nt   +upstreamnt  +downstreamnt
atgagttccacaggagcttcaaccaagggtggccgaggcaaaccaaagtcctcaaagtct
gtttctcggtcacagaaagctgggcttcaattccctgtgggtcgtatcgcccggttctta
aaagctggcaagtacgccgagcgtgtcggtgccggagctccggtttacctctccgccgtg
ctcgaataccttgctgctgaggttcttgagctagctggcaatgctgctagagacaacaag
aagaatcgtattgttccaagacacatacaacttgctgtgcgaaatgatgaggagttgagc
aagcttttgggaacggtcaccattgctaatggaggtgtcttgcccaacattcatcagaat
ttgttgcctaagaagattggtaaagggaaaggtgatattggatcagcatcgcaagagttt
tag

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