Quercus lobata (valley oak): 115973620
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Entry
115973620 CDS
T07350
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115973620
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115973620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
115973620
NCBI-ProteinID:
XP_030949738
UniProt:
A0A7N2LAB3
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MKKYKSLSLLLFLFFMVTLFSKISVEARNNHIRNSKTRKHQKDKSGNGNTHFPSPAPAPL
PHRGSNPNPSSSFDLFSFGAKGDGVSDDSKALLAAWKAACKFPGATIEIPSGFNFLIKPI
TLQGPCMPHLVLQIDGTLLAPPKVGSWPKSSLFQWINFKWVQNFTIQGTGTVDGQGSNWW
TTSQILYTQKKSNNIPDLRPTALRFYSSYDVTVSNIKIINSPQCHLKFDSSKGVKVNNIT
ISSPEDSLNTDGIHLQNTQDVEIQHSSIGCGDDCVSIQTGCSNVHVHHINCGPGHGISLG
GLGKDKSVACVSNIIVENVSIQNTLSGVRIKTWQGGIGSVKNVSFTNVQVSDVKVPIIID
QFYCDKNFCKNQTGAVAITGVKYDQIVGTYSVQPIHLACSNDIPCTGIDLIDIQLKPSPR
YRGFQQGLCLNSYGKSSAPLVPSSIDYCLRNSGGSVNRIERSHDNVC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatacaagagtttatctcttctcctttttctattctttatggtcacattattc
tccaaaatttcagttgaggcaagaaacaatcacattaggaattccaaaactcgtaagcac
caaaaagataagagtggcaatggcaacactcattttcctagtcctgcaccagcccctctt
cctcatcgcggttctaatcccaacccgtctagcagttttgatcttttttcatttggagct
aaaggtgatggagtttccgacgattctaaggcactcctagcagcatggaaagctgcatgc
aagtttcctggggctacaatagaaatcccatcaggattcaatttcctcatcaagcccata
actcttcagggtccttgtatgcctcaccttgttcttcagatagatggaactctcttagct
cctcccaaagttggttcgtggccaaaatccagtttatttcaatggattaatttcaaatgg
gtccaaaactttaccattcaaggcactggtactgttgatggccaaggctctaactggtgg
actacctctcaaattctttatactcagaaaaaatccaataacattccagatctcagacca
acagctttgagattctattctagctatgatgtcacagtaagcaacatcaaaatcataaac
agtccacagtgccacctaaagttcgacagctctaagggtgtcaaagttaacaatattaca
atttcttcgccagaagatagcctaaacactgatgggattcacctacaaaacacccaagac
gtagaaattcagcattctagtattggatgtggggatgattgtgtatccatacaaactggt
tgctccaatgtccatgttcatcatattaactgtggccctggacatggtataagcttagga
ggactagggaaggacaaaagtgttgcatgtgtctccaatataattgtggagaatgtctca
attcaaaacactctatcaggagtaaggatcaagacatggcaggggggcattggatctgtc
aaaaacgtatcatttaccaatgttcaagtttctgatgttaaggtaccaataatcatagac
cagttctattgtgacaagaatttctgcaagaaccaaacaggagctgtggcaataactggt
gttaagtatgaccagatagttgggacttattcagtgcaaccaattcatctcgcatgtagc
aatgacattccgtgcactggcattgatctaattgatattcagttgaagccttcgccacgc
tatcgaggttttcaacagggtctgtgtttgaactcttatgggaaatcaagtgctccattg
gttccttcaagcatagattattgcttaaggaatagtggtggttctgtcaacagaatagaa
agatcacatgataatgtgtgttga
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