Quercus lobata (valley oak): 115973708
Help
Entry
115973708 CDS
T07350
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115973708
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115973708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
DUF7460
Motif
Other DBs
NCBI-GeneID:
115973708
NCBI-ProteinID:
XP_030949830
UniProt:
A0A7N2N821
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MAYPKSSLVLALLSMFISLVIASPMTYNVVSLGAKGDGKTDSTQAFFSAWTKACASVSPA
IIYVPAGRFYLGQVVFSGPCKNNAITVRIDGTLVAPADYRVLGNTGNWLLFKHVDGVTIS
GGILDGQGTGLWACKASGNSCPSGATTLEFSNSNNIAVHALTSLNSQMFHIVINACHNVK
MQGVRVTAAGNSPNTDGIHVQLSSSVTILNSKIGTGDDCISIGPGTTNLWIENVACGPGH
GISIGSLGKDQQEAGVQNVTVKTATFTGTQNGVRIKSWGRPSNGFAKNILFQHAVMTNVQ
NPIVIDQNYCPGNKGCPGQASGVKISDVTYQDIHGTSATEVAVKFDCSSGNPCSRIRLED
VKLTYKNQVAQASCSHAAGTSTGFVQPTSCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcataccccaaaagctctcttgtccttgcacttctctctatgttcatttccttagtg
atagcatctcctatgacatacaatgtggtgagtttgggagccaagggagatgggaaaacg
gactcgactcaggctttttttagtgcatggacaaaagcttgtgcctcagtaagtcctgcc
ataatttatgtgccagcagggaggttctatctcgggcaagtggttttcagtggaccatgt
aagaacaatgctatcactgtgcgcatagatgggacacttgtggctccagcagactatagg
gtccttggaaatacaggaaactggcttttgtttaaacatgttgatggggttaccatatct
ggtggaattcttgatggccaaggcactggtttgtgggcttgcaaagcttctggcaatagt
tgtccttcgggagccacgacattggaattttcaaattcgaacaacattgcagtccatgca
ttaacctccctaaatagccaaatgttccacatcgtcatcaatgcttgccacaatgtgaaa
atgcaaggtgttagggtcactgctgctggaaacagtccaaacactgatggaattcatgtt
caattatcttcaagtgtcacaattctcaactccaagattgggactggtgatgattgcatc
tcaattggccctggtaccactaacttgtggattgagaatgttgcatgcggacctgggcat
ggaattagcattgggagtctaggtaaggaccagcaagaggctggggtacaaaatgtgact
gttaaaacagctacttttactggtactcagaatggggtgaggattaagtcatggggaagg
cctagcaatgggtttgctaagaacattctattccaacatgccgttatgacaaatgtccaa
aatcctatagtaattgaccaaaattactgtcctggcaataagggatgccctggtcaggct
tctggagtaaaaattagtgatgtgacataccaagatatccatggaacatcagcaacagag
gttgctgtgaaatttgattgtagttctggaaatccatgctctagaataagattggaggat
gtaaagctcacttacaagaatcaagtagcccaagcttcgtgtagccatgctgctggaaca
tctactggttttgtccagcccacaagttgcttgtag
DBGET
integrated database retrieval system