Quercus lobata (valley oak): 115973825
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Entry
115973825 CDS
T07350
Name
(RefSeq) dicer-like protein 4
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115973825
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115973825
microRNA pathway
RISC loading complex
115973825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
dsrm
NT5C
PAZ
Motif
Other DBs
NCBI-GeneID:
115973825
NCBI-ProteinID:
XP_030949926
LinkDB
All DBs
Position
2:91683239..91698564
Genome browser
AA seq
978 aa
AA seq
DB search
MLIHSTPISSLDPIPNSVALPSFAVPDSVPPSEVLPTTQSQPPLPVVNVHLMQTRSNHVD
SSGASISSGYSISLLHEYCSKLPCDEFFYPKPEFFYFDDLGGTVCHINLPPSAPLRRVIG
TPQSSLEAAKKDACLKAIEMLHKKGALNDYLLVGQDDVDVDGMGLDSSDSDSCEGEDPRG
ELHEMQVPAVLKEPWTNLENPVHFYSYYIEFIPHPEDRDYKKFGLFVKAALPEEAERMEL
KLHLARGRSVMTKFVPSGVAEFDKDEIVLAQNFQEMYLKVILDRSKFVPESVSLGKSNTC
ESNSLTFYLLLPVILHDSDKKITVDWKIIRRCLSSPIFRTPEDAVEKENFPLGDNLLLAN
GCRSISEVKDSLVYATPYKQGFFFITGIVDGKSGYSPHSETSRFRVQLKYPEQPLLQAKP
LFGLRNLLHNRKPEDSVSKTESRKLEEYFTDLPPELCQLKIIGFSKDIGSSISLLPSIMH
RLENFLLAIELKKTFSAAFPEGAEITCDRVLEALTTEKCQEGFSLERLEVLGDAFLKFAV
GRRLFLLHDTLDEGELTRKRSNVVNNSNLCKLATRSKLQVYIRDQSFDPLKFYAFGRPCP
IICNKQNEGSTHSRSSNLADRASFNEVRCSKGHHWLDKKTIADVVEALVGAFIVDSGFKA
ATSFLRWIGIQVDFEASQVSNVCIASTRYMPLRARMDIGALENLLGHQFLHRGLLLQAFV
HPSYNQHGGGSYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSVFVNNKAFANVA
VDRSFHQFLICDSSGLTEAIKIYVDSVKNPAPEGNPHEGPKYPKALGDLVESCVGAILLD
TGFNLNLVWKIMLSFLDPIMRFSSFQLSPIRELKELCQSHNWVLRTSASKKDRIFSVEVQ
VIGEDVCVTDSATNLNKKEAIRIASQRIFAKLKAQGYKLKSSLEEVLKSSCKMEAKLIGY
DETPIDVTTPDAKLPNWK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctcattcactctactcctatttcttctctagacccaattcctaattccgtcgctctt
ccctcctttgctgttccagattctgttcctccttcagaagtcttaccaactactcagtct
caacctccacttcctgttgtcaatgtgcatcttatgcaaaccaggtccaaccatgttgat
tcatctggtgcttctatcagctctggatatagcatctcattacttcatgaatattgttca
aaacttccctgtgatgagtttttttatcccaagccagaattcttttattttgatgactta
ggaggtactgtctgccacataaatttacctcccagtgctccactacgtcgtgttattggc
acaccacaatcttcacttgaagcagctaaaaaagacgcctgtctgaaagcaattgaaatg
ttacataaaaagggtgccttgaatgactatctcctggttgggcaagatgatgtagatgta
gacggaatggggctggattcttctgactcagatagctgtgaaggtgaggatccacgaggt
gaactgcatgagatgcaagttcctgctgtgctaaaagaaccgtggactaacttggagaat
cctgtccatttttactcttactacatagaatttattccacatcctgaggatagggactac
aaaaaatttggtctatttgtcaaagcagccctgcctgaagaggccgagagaatggaactt
aaacttcatctggctcgtggtagatctgtgatgaccaagtttgtgccatcgggagttgca
gaatttgataaagatgagattgtgctggcacagaattttcaagaaatgtacctcaaggtc
atccttgaccgatcaaaatttgttcctgaatctgtttccttgggaaagagcaatacttgt
gaatcaaattcattgaccttctacctgttgcttccagtaattttgcatgatagtgataaa
aaaattaccgtagattggaagattattagaagatgtttatcatcccctatttttaggacc
ccagaagatgccgtggaaaaggaaaatttccctttgggtgataatttgctacttgccaat
ggttgcagaagcataagtgaggttaaggatagtttagtgtatgccactccatacaaacag
ggttttttcttcatcactggcatagttgatggaaagagcggatacagccctcattcagaa
acttcaaggtttcgcgttcaactcaaataccctgaacaaccacttttacaagcaaaaccg
ctttttggcttgcgtaacttgctacataaccgaaagccagaagattcagtgtcaaaaaca
gaatcacgtaaactggaggagtactttactgatttgcctcccgagctttgtcagttgaag
ataataggcttttctaaagatattggtagttcgatatctttattaccatcaatcatgcat
cgtctggaaaactttcttttggccattgaactgaagaagacattttctgctgcattccca
gaaggagctgaaattacttgtgatagagtcctagaagcactcaccactgagaagtgccag
gagggcttttcccttgaaaggcttgaagtactaggtgatgcttttctcaagtttgcagtt
ggacggcgcctatttcttttgcatgatacccttgatgaaggagaacttacaaggaaacgt
tctaatgttgtaaacaactccaatttgtgcaaactagcaactaggagcaagttacaggta
tacatacgtgatcagtcatttgatcccttgaaattctatgctttcggtcgcccttgccca
ataatttgtaacaagcaaaatgaaggttctactcattcccggtcaagtaatctagcggat
cgtgcaagttttaatgaagtcaggtgcagtaaaggtcaccactggttagataagaaaaca
attgctgatgtggttgaagctcttgttggagcattcatagttgacagtggcttcaaagcc
gcaactagctttcttcgatggattggcatacaagtggactttgaagcctcacaagtttca
aatgtctgcattgcaagcactagatacatgccacttagagctcgtatggacattggtgcc
cttgaaaatttgttagggcatcagtttctccatagaggtctgcttctacaggcatttgta
catccttcttacaaccagcatggaggaggcagctatcagagattggagtttcttggagat
gctgtgttggattacttaatcacatcatatctgtattcagtttatccaaagttgaagcct
ggtcaattgacagatttgagatcggtatttgtgaacaacaaggcctttgcaaatgttgca
gtagatagatccttccaccaatttctcatctgtgattccagtggccttactgaggccatc
aaaatttatgtggactctgttaaaaatcctgcaccagaaggaaatcctcatgaggggcca
aaatatcctaaggctttgggtgacttggtagagtcttgtgtgggtgccattcttcttgat
acagggtttaacttgaaccttgtgtggaagataatgctttcctttttggatccaataatg
aggttctccagttttcagcttagtcctattagagaactgaaagaactttgccaatctcat
aattgggtcctacgaacttcagcatcaaagaaggatagaatattttcagttgaagtacag
gtgatcggagaagatgtttgtgtaactgattctgcaaccaacctgaacaagaaagaagct
attagaattgcttcacaaagaatatttgcaaagttgaaggctcaaggctacaagctcaag
tcatctttggaggaagttttgaagtcaagctgcaagatggaagccaaactaattggatat
gatgaaacacctatagatgtaactactcctgatgccaaattaccaaactggaaatga
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