Quercus lobata (valley oak): 115974426
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Entry
115974426 CDS
T07350
Name
(RefSeq) transcription initiation factor IIF subunit beta isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115974426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115974426
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
115974426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
Motif
Other DBs
NCBI-GeneID:
115974426
NCBI-ProteinID:
XP_030950657
UniProt:
A0A7N2KSW1
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All DBs
Position
2:complement(10499156..10503942)
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AA seq
266 aa
AA seq
DB search
MEEEHHGSSSSTSNLETGRAERSVWLMKCPLVVAKSWQAHPSSDPHPLAKVVLSLDPLQS
DSSSSLQFTMEMAANEAGNIPKSYSLNMFKDFVPMSVFSETNQANVHVGKVAMEGKVEHK
FDMKPHGENIEDYGKLCRERTKKSMIKNRCIQVIDNDRGVHMRPMPGMIGLISSTSKDKK
KAAPVKQSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVY
NKRGTNQGTYELKPEYKKAAEDTNAE
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaacatcatggtagtagcagtagtactagtaacttggagacagggagagcg
gagagatcggtgtggttgatgaagtgtcctttagtcgttgcaaagtcatggcaagctcat
ccatcctcggaccctcaccctctcgctaaggttgtcctctccctcgatcctcttcaatct
gattcctcctcttccctccagttcacaatggagatggctgccaatgaggcagggaatatt
ccgaaaagttattctttgaatatgtttaaagattttgttcctatgtctgtattttctgag
acaaatcaagctaatgtgcatgtagggaaggttgcaatggaaggaaaggtagagcataag
tttgacatgaagccccatggtgaaaacattgaagattatggcaaactttgccgtgaaagg
acaaagaagtccatgataaagaatagatgtatacaggtgattgacaatgaccgtggagtg
catatgaggcccatgcctggaatgattggtttgatttcatccacttccaaggataagaag
aaggctgcaccagtgaagcaatcagacatgaaaagaactagaagagatcgtggggaactg
gaggatataatgtttaagttatttgaaagacaaccaaattgggccttaaagcaacttgtc
caagagacagatcaaccggcacaattcttaaaggagatattgaacgagctgtgtgtttac
aataaaaggggaaccaaccaaggaacttatgagcttaagccagaatacaagaaggctgct
gaagatacaaatgctgaataa
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