KEGG   Quercus lobata (valley oak): 115974747
Entry
115974747         CDS       T07350                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03082  ATP-dependent chromatin remodeling
qlo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115974747
   03083 Polycomb repressive complex
    115974747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qlo03036]
    115974747
Enzymes [BR:qlo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     115974747
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     115974747
   HDAC complexes
    Sin3A-HDAC complex
     115974747
    BRAF-HDAC complex
     115974747
    REST complex
     115974747
    SHIP complex
     115974747
    MiDAC complex
     115974747
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     115974747
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    115974747
  Chromatin remodeling factors
   NuRD complex
    115974747
SSDB
Motif
Pfam: Hist_deacetyl GP67
Other DBs
NCBI-GeneID: 115974747
NCBI-ProteinID: XP_030951109
UniProt: A0A7N2KTG9
LinkDB
Position
2:16467144..16474476
AA seq 474 aa
METGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHAMKPHRIRMTHALLAHYGLLQHMQ
VLKPTPARDRDLCKFHADDYVNFLRAITPETQQDQLRLLKRFNVGEDCPVFDGLYAFCQT
YAGGSVGGAVKLNQGGCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFKPIIGKVMEVYRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFIRSFN
VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN
KNSRPLLDEIRERLLDYLSKLQHAPSAQFQERPPDTQLLEDDEDQDDGDDRWDRDSDMDS
DDDRKALPGRVKREYIESEPKNLAPTVMAIDEPSIKVEQDNSNKSSDQHTDMNS
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggaaacgggaggcaattcccttccgtccggccctgatggggtgaagaggaaagtgtca
tatttctatgacccggaagttggaaattattattacggacaaggtcacgcgatgaagcct
catagaattcgaatgacacatgctcttttagcccactatggattgcttcagcatatgcag
gtcttgaagcccactcctgctagagatagggatctttgcaagttccacgctgatgattat
gtgaattttcttagagccatcaccccggagacgcagcaagatcagctgaggctgctaaag
aggtttaatgttggtgaagactgcccggtatttgatggtctttacgcattctgtcagact
tatgctgggggttcagttggtggtgctgttaaattgaatcaaggaggctgtgatattgcg
ataaactgggctggtgggttgcatcatgccaaaaagtgtgaggcttctggattctgctat
gtgaatgatattgtcttgggaattttggagctcctcaaagtacatgagcgtgttttgtat
gtggacattgatatccaccatggtgatggtgtagaggaggctttttacacaactgataga
gtcatgactgtttcatttcataaatttggagactatttccctggtacaggcgatattcgt
gatattggatatggaaaaggaaaatattattctcttaatgtacccctagatgatggtatt
gatgatgagagctaccagtcattgtttaagccaataataggtaaagtgatggaagtttac
aggcctggtgctgtggtcctacagtgtggtgcagactctttgtctggcgacagattaggg
tgtttcaatctatcaattaaaggccatgcagagtgtgttagatttatcagatctttcaat
gtgccacttctattggtgggtggaggtggttatacaatacgaaatgtcgctcgttgctgg
tgttatgagacgggtgttgcacttgggattgaagttgatgataagatgccacaacatgag
tattacgagtactttggtccagactataatcttcatgtagctccaagtaacatggaaaac
aagaactcccgtccattattggatgagataagagaaagactccttgattatctatctaag
ctgcaacatgcaccaagtgcccagttccaagagcgcccacctgatacacagcttctcgag
gatgatgaagatcaagatgatggagatgatagatgggatcgtgattctgacatggattct
gatgatgaccgtaaagctctgccaggtcgagtaaagagagaatacatcgaatctgaacct
aaaaatttggcaccaactgtgatggcaatagatgagccatccatcaaagtggagcaggat
aactcgaacaaatcatcggatcaacacactgatatgaactcatga

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