KEGG   Quercus lobata (valley oak): 115975079
Entry
115975079         CDS       T07350                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03013  Nucleocytoplasmic transport
qlo03015  mRNA surveillance pathway
qlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115975079
  09122 Translation
   03013 Nucleocytoplasmic transport
    115975079
   03015 mRNA surveillance pathway
    115975079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qlo03019]
    115975079
   03041 Spliceosome [BR:qlo03041]
    115975079
Messenger RNA biogenesis [BR:qlo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     115975079
Spliceosome [BR:qlo03041]
 Complex C
  Other components
   EJC/TREX
    115975079
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 DUF3138
Other DBs
NCBI-GeneID: 115975079
NCBI-ProteinID: XP_030951586
UniProt: A0A7N2KKS3
LinkDB
Position
1:4064138..4068296
AA seq 226 aa
MASAAEVEAVDFEPEDDDLMDEDGGIADAALDASASPRAPLHQQQQPKLKSAITGGASSS
ASAAAAAAAAAAARKTKGRGFRDDHHPESADRSSRLANSNFDSLKSGDGPGPQRSVEGWI
ILVTGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAQNAISSM
NGAELLTQTISVDWAFSSGSSANGTMKRKNTRPPRERRSRSPRRRY
NT seq 681 nt   +upstreamnt  +downstreamnt
atggcgagtgcagcagaggttgaggcagtggatttcgagccagaggatgacgacctcatg
gacgaggacggaggcatcgccgatgccgccttagacgcctccgcctcgccgcgggcccca
ctccaccagcaacagcagccgaagctcaagtccgccataacgggcggcgcctcttcctcc
gcctccgcagccgctgctgctgcggccgccgccgcagctaggaagaccaaagggcgtgga
ttccgtgacgaccaccaccccgaatcggccgaccggtcttcgagactcgccaactccaac
ttcgactccctcaagtctggggatggccctggtcctcaacgatctgttgaaggatggatt
attctggtcactggagtgcatgaagaggcacaggaggatgatctgcaaaattcttttggt
gagtttggggagatcaagaatctgcatttaaatcttgatcgccgcacagggtttgtcaag
gggtatgccctgattgaatacgagaactttgaggaagcacagaatgctatatcctcaatg
aatggggctgaacttcttacgcaaactatcagcgttgactgggctttcagcagtggttcc
tctgccaatggaacgatgaaaagaaagaatacaaggccacccagagaacgtcgttcaagg
agtccaaggaggagatactag

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