Quercus lobata (valley oak): 115975079
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Entry
115975079 CDS
T07350
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
qlo03015
mRNA surveillance pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115975079
09122 Translation
03013 Nucleocytoplasmic transport
115975079
03015 mRNA surveillance pathway
115975079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115975079
03041 Spliceosome [BR:
qlo03041
]
115975079
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115975079
Spliceosome [BR:
qlo03041
]
Complex C
Other components
EJC/TREX
115975079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DUF3138
Motif
Other DBs
NCBI-GeneID:
115975079
NCBI-ProteinID:
XP_030951586
UniProt:
A0A7N2KKS3
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Position
1:4064138..4068296
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AA seq
226 aa
AA seq
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MASAAEVEAVDFEPEDDDLMDEDGGIADAALDASASPRAPLHQQQQPKLKSAITGGASSS
ASAAAAAAAAAAARKTKGRGFRDDHHPESADRSSRLANSNFDSLKSGDGPGPQRSVEGWI
ILVTGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAQNAISSM
NGAELLTQTISVDWAFSSGSSANGTMKRKNTRPPRERRSRSPRRRY
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgcagcagaggttgaggcagtggatttcgagccagaggatgacgacctcatg
gacgaggacggaggcatcgccgatgccgccttagacgcctccgcctcgccgcgggcccca
ctccaccagcaacagcagccgaagctcaagtccgccataacgggcggcgcctcttcctcc
gcctccgcagccgctgctgctgcggccgccgccgcagctaggaagaccaaagggcgtgga
ttccgtgacgaccaccaccccgaatcggccgaccggtcttcgagactcgccaactccaac
ttcgactccctcaagtctggggatggccctggtcctcaacgatctgttgaaggatggatt
attctggtcactggagtgcatgaagaggcacaggaggatgatctgcaaaattcttttggt
gagtttggggagatcaagaatctgcatttaaatcttgatcgccgcacagggtttgtcaag
gggtatgccctgattgaatacgagaactttgaggaagcacagaatgctatatcctcaatg
aatggggctgaacttcttacgcaaactatcagcgttgactgggctttcagcagtggttcc
tctgccaatggaacgatgaaaagaaagaatacaaggccacccagagaacgtcgttcaagg
agtccaaggaggagatactag
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