Quercus lobata (valley oak): 115975114
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Entry
115975114 CDS
T07350
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115975114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115975114
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
115975114
Prokaryotic type
Archaeal type
TFB
115975114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
WHD_GDS1
Zn_ribbon_LysW
RB_B
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
115975114
NCBI-ProteinID:
XP_030951632
UniProt:
A0A7N2KKQ7
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All DBs
Position
1:complement(4130148..4136951)
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AA seq
323 aa
AA seq
DB search
MASSASSLSSEWLCPECKRATEVVLDHSAGDTVCSECGLVLEAHSIDETSEWRTFTNESG
DSDPVRVGGPSNPLLSDGGLSTVISSRPNNANGGSDFLGSGLGRWQSRGSNPDHSLLQAF
KAIASMSERLGLVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTVK
EICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKA
AQEAVQKSEELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLSTGVAEGTIRNSYKDLY
PYAVRLIPSWYAKEEDLGNLCSP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcagcatcatcattatcgtcagagtggttatgtccagagtgcaagcgagca
acggaggtggtgctagaccactcagcaggcgacaccgtgtgctccgagtgtggcctcgtt
ctcgaggctcactccatcgacgagacctcagagtggcgcaccttcaccaacgagtccggt
gacagcgaccccgttcgcgtcggtgggccctccaaccctctgctttccgacggcggcctc
tccaccgtgatatcttcaagacccaataatgcgaacggtgggagtgacttcttgggttcg
ggtttgggccggtggcagagccgtgggtctaacccggaccactcgcttcttcaggctttt
aaagccattgcctccatgtctgagaggttgggccttgttgcaacaataaaggatcgagcc
aatgaaatatataagaaagtagaagatcaaaaacctctccgaggaagaaatcaggatgca
attttggctgcttgcctctacattgcttgtcgtcaagaagacaagccccgcactgtgaaa
gaaatttgttctgttgctaatggagccacaaagaaggaaattggtcgtgcaaaagagttt
attgtaaaacaactggaagtagagatgggtcagtctatggaaatgggaaccatacatgct
ggggattttttgagacgtttttgttcccaccttggcatgactaatcaagcagtaaaggct
gctcaagaagctgtacagaaatctgaagaacttgatataaggaggagcccaatatcagta
gcagcagctgtaatttatatgataactcagctatcagatgacaagaagcttctcaaagac
atatctctttccactggagtggctgaagggaccatcaggaattcctacaaggatctttat
ccctatgctgtaaggctaataccaagttggtatgcgaaggaggaagatcttgggaacctc
tgcagcccataa
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integrated database retrieval system
