Quercus lobata (valley oak): 115975143
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Entry
115975143 CDS
T07350
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115975143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115975143
03036 Chromosome and associated proteins [BR:
qlo03036
]
115975143
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115975143
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115975143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
115975143
NCBI-ProteinID:
XP_030951673
UniProt:
A0A7N2KUZ6
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Position
2:complement(26876969..26885966)
Genome browser
AA seq
993 aa
AA seq
DB search
MFSSNPFGQSSSSPFGSPSVFGQTSNANNNPFAPKPFGTSTPFGSQTGGSLFGGTSTGVF
GVTTQPSSPFSSTATFGASSSPAFGSTMSAFGASSTPSFGTSSSSFGGSSVFGQKPAFGG
FGSTPTPTSPFGSTNQQSQPAFGSSMFGSTAPFGATSQSAFSASSTPAFGSTGTPAFGAA
STPAFGATSSPAFGSATTPTFGSTGTAFGVSNAPVFGSGGAFGASSSPMFGSSSTPAFGA
SSTPAFGASSAPAFGASTTPAFGATTSAFGAASTPAFGASTSPSFSFGSTPAFGQSSSTF
GSSPFGSTTPFGAQSSPFGAQSTAPAFGGTGIGQSPFGSQRGGSRVAAYTPTTEADNSAG
AQAGGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPAGQPSGGISFNSSPSPSFGQS
AANPFSSSMPSNPFAPKNSSIGALNFTSTATPQFSSSPFSASTSSSLFGSASLSTTTNTF
GLNSSPSIFGQPSIFNSGSAQTTNPAFTSNTQSSPLFQSSPPIGQTSSTFGQSSFGPTTN
SPFGQGLGPSSTGFNTFSSTPSLSFSQTNPSFSMPFQPAQPAQTASTFNLSNYGQTQPAG
GSIFAGSSGTLGQSNIGQLSATQSSAVLQPVPATNPFGTLPALPQMSIGRVGTTPSIQYG
ISSLPVVDKPAPVRISSLLTSRHLSQRRIRLPARKYHTKHDGPKVPFFSDDEETPSSTPK
ADALFIPRENPRSLVIRPIEQWPMRASVEKASPLKESTLVHENGKVSEEAGTPFQGGSIS
EYKDKSSVENGLAKERVHNLKVNQKPNGVHEDHSVQKGDSYMTLSGHRAGEAAIVYEHGA
DIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRHVSDFVVGRHGYGSIKFLGQTDVRR
LDLEALVQFNNREVIVYMDDSKKPPIGQGLNKPAEVTLLNVKCFDKKTGQQYTEGPKIEK
YKEMLKRKAEDQGAEFVSYDPIKGEWKFRVNHF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttcgaacccttttgggcagtcttctagtagcccatttgggtccccatcagtc
tttgggcagaccagcaatgcaaataacaatccatttgctccaaagccctttggtacttca
acaccttttggttcacaaactgggggttctttatttgggggtacatcaactggagttttt
ggtgtaacaacccaaccgtcttcaccattctcttccactgcgacctttggtgcttcatca
tcaccggcatttggaagtacaatgtctgcttttggagcatcttctactccttctttcggt
acttcatcatcatcatttggtgggtcatctgtttttggtcagaagcctgcttttggtggc
tttgggtccactcctactccaacaagtccctttggaagcacaaatcaacaatcacagcca
gcatttggaagtagtatgtttggttccactgcaccttttggtgcaacaagtcaatctgca
tttagtgcaagtagtactccagcttttgggtcaaccggcactcctgcatttggtgctgca
agcaccccagcctttggtgctacaagctctccagcctttggttcagcaacaactcctaca
tttggcagcacagggactgcattcggtgtgtcaaatgcccctgtatttggatctggcgga
gcatttggagcttcaagcagccctatgtttggttcctcaagcacacctgcattcggtgcc
tcgagcactcctgcatttggtgcctcgagtgctcctgcatttggtgcctcaactactcca
gcttttggtgccacaacatctgcatttggtgctgcaagtactcctgcttttggggcttct
acttccccgtcctttagctttgggtccactccagcttttggtcaatcaagttctacattt
ggtagcagcccatttggaagcacaactccttttggagcccaaagttctccatttggagca
caatctacagcaccagcatttggtggcactggcattgggcagtcaccttttgggagtcaa
cgtgggggaagtagagtagctgcttacactccaacaactgaagcggacaatagtgctggt
gcacaggctggtgggaaattagagtcaatatcagctatgcctgtatacaaagataaaagc
catgaggagctgagatgggaggactatcaattgggagataaaggtggaccactccctgct
ggtcagccttctggtgggataagctttaattcatctccctccccatcatttggccagtca
gctgcaaatcctttctcttcctcaatgccttccaatccatttgcaccaaaaaattccagc
attggtgctttaaattttacaagcacagctactcctcagttcagttcttcaccttttagt
gcatcaacttcatccagcctttttggatcagcatcattatcaacaacgacaaatacattt
ggtcttaattcatctccatctatatttggtcaaccatctatctttaattctggttcagct
cagacaacaaatccagcatttactagtaacactcagtcatcccctttattccaatcctct
ccaccaatcgggcagacgagctccacatttggacaatcttcatttggaccgactacaaat
tcaccctttggtcaaggactcggtccttcctccactggatttaacactttttcaagcact
ccatcacttagtttcagtcaaacaaatccctctttttcaatgccttttcaaccggctcag
cctgctcagacagctagcacttttaaccttagtaattatggtcagacacaaccagctggt
ggaagtatctttgctggatcatcaggcactttgggtcaaagtaacattggacaattgtct
gctacccagagctctgcagttttacaaccagtacctgctacaaatccatttggaacactc
cctgcattgcctcaaatgtcaattggtcgagttggaaccacaccttcaattcaatacgga
atttcctccttgccagttgttgataaacctgctcctgtccgaatatcatccttattgact
tctcgacacctgtcacaaaggcggattaggttgcctgcaaggaaatatcatactaagcat
gatgggccgaaggttccattctttagtgatgatgaagaaacacccagcagcacaccaaag
gcagatgctcttttcattcctagggaaaatccaagatcactggtcattcgtcccatagag
cagtggcctatgagagctagtgttgagaaagcatctccattgaaggaatccactttggtg
catgagaatgggaaagtttctgaagaggcaggcactccttttcaaggtggctccatctct
gagtataaggataaaagttcagttgaaaatggtcttgccaaggaacgtgttcataatctc
aaagtcaatcagaaaccaaatggggttcatgaagatcattctgttcaaaaaggggattct
tatatgacactcagtggacacagagctggtgaggctgccattgtgtatgagcatggggct
gacattgaggcactaatgccaaagctccgacgttctgattactacactgagccgcgaatc
caagaactagcagcgaaggaaagggctgagccagggttctgccgtcatgtcagtgatttt
gtggttggacgtcatggctatggcagcatcaaattcctaggccagacagatgtgcggcgg
cttgatcttgaggctcttgttcagtttaacaatcgcgaagtgatcgtatacatggatgac
agcaagaaacctcccattggacaaggcctaaataagcctgctgaggtaacacttcttaat
gtaaaatgctttgacaagaaaactggacagcagtatacagaagggccaaagattgaaaag
tacaaggagatgctgaagaggaaggctgaggaccaaggtgctgagtttgtgtcttatgac
cccatcaaaggagagtggaagttcagagtcaatcacttctga
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