Quercus lobata (valley oak): 115975144
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Entry
115975144 CDS
T07350
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115975144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115975144
03036 Chromosome and associated proteins [BR:
qlo03036
]
115975144
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115975144
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115975144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
115975144
NCBI-ProteinID:
XP_030951674
UniProt:
A0A7N2KUG2
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Position
2:complement(26911098..26917966)
Genome browser
AA seq
897 aa
AA seq
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MNSFSATSTPAIGAMTTPAFAVMSTPAFTIMSNPTFSSTSPAKIEVIVLSVPVFRSDGAF
GATSSPMFGSSSTSILGSSSTPTCGALSTPAFVSSSVPSFSVGSTLDFGQSTPAISAASI
PTFGVMSTLAFSVTSTPTFSSTASPAFFVSITPVFGSSGAIEASSSPIFGSSSTSMFGSS
TTPAFGASSMPTLGVPTTPAFGSFSASAFGASSNPSFSVGSTSAVGQSTSAFGSSPFGTT
ATPFGAQNSPFGAQSTAPAFGGTGIEQSPFGSQRGGSRVAAYTPTTEADSSAGAQAGGKL
ESISAMPVYKDKSHEELRWEDYQLGDKRGLAMTTSAFSATCTPRSPTFISTETPTLCSIG
IAFGVSSAPVFGSGRALGGSSTPVFGATSTPAFGTRATPAFVSKGTTFGVSSAPAFGSGG
AFGASSSPISSSSSTPVFGASSMTAFSVSSTPPLGTLTTPAFGASTAPAFGALSMPAFGA
TSTPAFGTTATPAFGSKGATFGLSSAPAFGSGGAFGASSSPISSSSSTPAFGASSMTAFS
VSSTPALGTLTTPAFGASTTTAFGASSMPAFGFMSTPAFGTTVTPASGSKGTTFGVSSAP
VFGSGGAFGASSSPISSSSSTPAFGASSMTAFSVSSTPALGTLTTSAFGASTTPAFGASN
APSFSFGSTSAFGSSPFGTTTTPFGAQSSPFGAQPTTTFCSTGFGLGSKREGSRVAAYTP
TSEADGCAQAELESISAMPEYKDKSHEELRWEDHQLGDKSRPLHLPAGGICFGLSPSPTY
GQSAASPSLGGLTFAGSATPTFGSSPFSTSTSSSLFGSTSLSTTNVFGFSSSPSIFGSPS
SLFNSGPSQATNPAFGRYTQSSPLFQSSTPAIGQTGSTSGQTTSLGQSTSSPIGQGI
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatttagtgctacaagtacacctgccattggtgctatgaccacccctgccttt
gccgtaatgagcacccctgcctttaccattatgagcaacccaacctttagttcaacaagt
cctgcaaagattgaagtcattgtgttgagtgtccctgtatttagatctgatggagcattt
ggagctacaagcagtcctatgtttggttcatccagtacttctatattgggttcttcaagc
acaccaacatgtggtgccttaagtactcctgcttttgtgtcttctagtgtcccttccttc
agtgttgggtccactttagattttggccaatcaactcctgcaattagtgctgcaagcata
cctacatttggtgttatgagcacccttgcctttagtgttacaagcaccccaacctttagt
tcaacagcaagtcctgcattctttgtgtcaattactcctgtatttggttctagtggagca
attgaagcttcaagcagccctatatttggttcatctagtacttctatgtttggttcgtca
accactcctgcatttggtgcctcgagcatgccaacacttggtgtcccaactactcctgca
tttggttcctttagtgcttctgcttttggggcttctagtaacccatctttcagtgttggt
tccacttcagctgttggccaatcgacttctgcatttggtagcagcccatttggtaccact
gccactccttttggagctcagaattctccttttggagcacaatctacagcaccagcattt
ggtggcactggcattgagcagtcaccttttgggagtcaacgtgggggaagtagagtagct
gcttacactccaacaactgaagcagacagtagtgctggtgcacaggctggtgggaaatta
gagtcaatatcagctatgcctgtatacaaagataaaagccatgaggagctgagatgggag
gactatcaattgggagataaacgtggacttgctatgaccacctctgcctttagtgctacg
tgcaccccaaggtccccaacctttatttcaacagaaactcctacattgtgtagcataggg
attgcatttggtgtgtcaagtgcccctgtatttggatctggcagagcattgggaggttca
agcacacctgtatttggtgctacgagcaccccagcctttggtacaagagcaacgcctgca
tttgttagcaaagggacaacattcggtgtgtcaagtgcccctgcatttggatctggtgga
gcatttggagcttcaagcagtcctatatctagttcttcaagcacccctgtatttggtgca
tcaagcatgactgcatttagtgtctcaagcacgcctccgcttggtaccttaactactcct
gcatttggtgcctcaactgcacctgcttttggggctttgagcatgcctgcatttggtgct
acgagcaccccagcctttgggacaacagcaactcctgcatttggcagcaaaggggcaaca
tttggtttgtcaagtgcccctgcatttggatctggtggagcatttggagcttcaagcagt
cctatatctagttcttcaagcacccctgcatttggtgcgtcgagcatgactgcatttagt
gtctcaagcacgcctgcgcttggtaccttaactactcctgcatttggtgcctcaactacg
actgcttttggggcttcgagcatgcctgcatttggttttatgagcaccccagcctttggt
acaacagtaactcctgcatctggtagcaaagggacgacattcggtgtgtcaagtgcccct
gtatttggatctggtggagcatttggagcttcaagcagtcctatatctagttcttcaagc
acacctgcatttggtgcatcgagcatgactgcatttagtgtctcaagcacgcctgcactg
ggtaccctaactacttctgcatttggtgcctcaactacacctgcttttggggcttcaaat
gcaccatccttcagctttgggtccacttcagcatttggtagcagcccatttggtaccacc
actactccgtttggagcccagagttctccctttggagctcaacctacaacaacattttgt
agcactggctttgggcttgggagtaaacgtgagggaagtagagtagctgcgtacactcca
acatccgaagcagatggctgtgcacaggcagaattagaatcaatatcagccatgcctgaa
tacaaagataaaagtcatgaggagctgagatgggaggaccatcaattgggagataaaagt
agaccacttcatcttcctgctggtgggatttgctttggtttgtctccctcaccaacatat
ggccaatcagctgcaagtcctagccttggtggtttaacttttgcagggtcagctactcct
acgttcggttcttcaccttttagcacgtcaacttcatccagcctttttggatcaacatca
ttatcaacaacaaatgtatttggatttagttcatctccatctatttttggttcaccatca
tctctcttcaactctggtccatctcaggcaacaaatccagcatttggtaggtacactcag
tcatccccactattccaatcatctacgcctgcaatcgggcagacaggctctacttctgga
cagacaacttcccttgggcagagtacaagttcacccattggtcaaggaatctag
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