Quercus lobata (valley oak): 115975145
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Entry
115975145 CDS
T07350
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115975145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115975145
03036 Chromosome and associated proteins [BR:
qlo03036
]
115975145
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115975145
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115975145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
115975145
NCBI-ProteinID:
XP_030951681
UniProt:
A0A7N2QYT2
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All DBs
Position
2:complement(26893340..26899079)
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AA seq
709 aa
AA seq
DB search
MHNLTITSGIRSSIFGSSTPFGATSQSASGASSTPAFSVTTMLSFSATSTPAIGAMPTPT
FEVSIPASGAISNLAISVTSTPTSSSTSSPAFSVSITPVFGSGGAIGASGSPVFGSSSTP
AFGVSTTPIFGSFSITLSLSVESTSAFGQSTSAFGSSPFGTTATPFGVQNSPFGAQNSPF
GAQSTTLRFGGTSIQQSPFGSQSWGSRVAAYTPTTEFQNGAPTAGNLQSLSAMPVYKDKS
HEELRWVDYQVGDKGKPAMTAFNVSNTPAFNSMWTPNSTATPRIGSMGTAFGLSGAPVFG
SGRVFGGSSSPVICSSSTPAFDAYAPAFGAFCRRAFGASISPASGATSTPAFGAVSTPAF
GSTTTPAFGSTGIAIGGSSVPVFGSGGAFGASSRPIFSSSTPKFGVSSSPAFGASPTAAF
EAFNAPSFSQSTSAFSSSPFSNTTTPFGAQSSLGAQPTTAFGSTGYWQSPFGNQAGGTAY
TPKSEADCSAQAAGELESISALHEYKDKSHEELKSEDNQLRDTGGPLCVPVGGIFFSSSH
SPTFGQSAASPFSFSMPSNQFAPKTSSLGGLTFAGSATPAFSSSPFSKSTSPSLFGLASL
STTTNTFGLNSSPSIFGSAPSFFNSGPSQATNPAFGSYTQPSPVLQSSTPTIRQIGSTFG
QTTSLGQSTGSHFGHEICGASSTGFRDDKNSSQGTNTVVGWVPFGWHGV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcataatttaacaatcacatctggaattagaagtagcatatttggttcctccacacct
tttggtgcaacaagtcagtctgcatctggtgcaagcagcacccctgcctttagtgttaca
accatgctttcatttagtgctacaagcacacctgcaataggtgccatgcccacccctacc
tttgaggttagcatccctgcctctggtgctataagcaaccttgccattagtgttacaagc
accccaacctctagttcaacatcaagtcctgcattctctgtttcaattacccctgtattt
ggatcgggtggagcaattggagcttcaggcagtcctgtatttggttcttcaagcactcct
gcatttggtgtctcaactactcctatatttggttccttttctattaccctgtctctcagt
gttgagtccacttcagcttttggccaatcaacttctgcatttggtagcagcccatttggt
accactgctactccttttggagttcagaattctccttttggtgctcagaattctcctttt
ggagcccagtcgacaacgctaagatttggtggcactagcattcagcagtcgccttttggg
agtcaaagttggggaagtagagtagctgcatacactccaacaactgagtttcagaatggg
gcaccaactgctgggaatttacagtcattatcagccatgcctgtctacaaagataaaagt
catgaggagctgagatgggtggactatcaagtgggagataaaggtaaaccagctatgacc
gcctttaatgtttcaaacacccctgcctttaattctatgtggaccccaaattcaacagca
actcctagaattggtagcatggggactgcatttggtttgtcgggtgcccctgtatttgga
tccggcagagtatttggaggttcaagcagtcctgtaatttgttcttcaagcacacctgca
tttgatgcctatgcgcctgcatttggtgccttttgcaggcgtgcatttggtgcctcaatt
tctcctgcatctggtgccacaagcacacctgcatttggtgctgtgagcaccccagccttt
ggttcaacaacaactcctgcatttggtagcacagggattgcaattggtgggtcaagtgtc
cctgtgtttggatctggtggtgcatttggagcttcaagtaggcctatattttcttcaagc
acccctaaatttggtgtgtcaagctcacctgcatttggtgcctcacctactgctgccttt
gaggcttttaatgccccatccttcagccaatcaacttctgcatttagtagcagcccgttt
agtaataccactactccatttggagcccagagttctcttggagctcaacctacaacagca
tttggcagcactggctattggcaatcaccttttgggaatcaagctggtggaactgcgtac
actccaaaatctgaagctgactgcagtgcacaggctgctggggaattagagtcaatatca
gccctgcatgaatacaaagataaaagtcatgaggagctgaaatcggaggacaatcaatta
agagatacaggtggaccactttgcgttcctgttggtgggatattctttagttcgtctcac
tcaccaacatttggccaatcagctgcgagtcctttctctttctcaatgccttccaatcaa
tttgcaccaaaaacttccagccttggtggtttaacttttgccggctcagctactcctgca
ttcagttcttcaccttttagcaagtcaacttcacccagcctttttggattagcatcatta
tcaacaacaacaaatacatttggtcttaattcatctccatctatatttggttcagcacca
tctttcttcaactctggtccatctcaggcaacaaatccagcatttggtagttacactcag
ccatccccagtattgcaatcatctacgcccacaatcaggcagattggctctacttttgga
cagacaacttcccttggacagagtacaggttcacactttggtcatgaaatatgtggtgct
tcctctactggatttagggatgacaaaaattcctctcagggcacgaatactgtggttggt
tgggtacctttcggttggcatggagtttga
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