Quercus lobata (valley oak): 115975515
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Entry
115975515 CDS
T07350
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115975515
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115975515
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
TGF_beta
Motif
Other DBs
NCBI-GeneID:
115975515
NCBI-ProteinID:
XP_030952177
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All DBs
Position
2:complement(37727808..37740403)
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AA seq
443 aa
AA seq
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MTEPSKVIHVRNVGPEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDIPSAVNALQF
YANVQPSIRGRNVYVQFSSHQELTTMDQNTQGRGDEPNRILLVTIHHMLYPITVDVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVVARTALQGRNIYDGCCQLDIQYSNLDEL
QVNYNNERSRDFTNPNLPTEQKGRSSQPGYGDAGGMYALQATGRAVPFPQMANTTAIAAA
FGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALIQM
GDGLQAELAVNFLKGAMLFEKPMEVNFSKHPNITQGADTHEYINSNLNRFNRNAQKNYRY
CCSPTKMIHLSTLPQDLTEEEIVSHLEEHGTIVNTKLFEMNGKKQALVLFETEEQATEAL
VCKHATSVSGSIIRISFSQLQAI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccttctaaggtcattcacgttcgcaatgtgggccccgaaatatctgaaaat
gatttgcttcagctattccagccatttggagtcataactaagcttgtgatgcttcgagca
aaaaatcaggctcttatccaaatgcaagatattccttcagcagttaatgctctgcaattc
tatgcaaacgtccagccaagcataagggggaggaatgtttatgtccagttctcatcacat
caggaactaacaacaatggatcaaaacactcaagggcgaggagatgagccaaatcgaatt
cttctagttacaattcaccacatgctatatccaataacagtggacgtgctgcatcaagtg
ttttctccgcatggatttgtggagaagatcgtcacttttcagaagtcagctggctttcaa
gcccttattcagtatcaatcacgtcagagtgctgttgtagctagaactgcacttcaggga
cgtaatatttatgatggttgctgtcagctggacattcagtactcgaaccttgacgagtta
caagtaaactacaataatgagcgttctagggatttcacaaacccaaatctacctacagaa
cagaaaggcagatcatcacaacccgggtatggggatgcaggaggcatgtatgcccttcaa
gctactgggcgggcagttccatttccacagatggccaatacaacagccattgcggctgcc
tttggaggaggtttgcctcctggaataagtgggacaaatgacaggtgtacagtccttgtt
tccaatctcaatcctgatagaatagatgaggataagctcttcaaccttttctctttatat
ggaaacattgtgagaattaaacttctccgcaataaaccagatcatgcactcattcagatg
ggtgatggcttgcaggctgaactggcagttaactttttgaagggagcaatgctatttgag
aagccaatggaggtgaacttttcaaagcatccaaatataacccaaggtgctgacacccat
gagtacataaactcaaatctcaaccgcttcaaccgtaatgctcaaaagaattaccgctac
tgctgctcccccacaaaaatgatacacctatctactctcccccaggatctcactgaggag
gagattgtgagccacttggaagaacacggcaccattgtcaacactaagcttttcgaaatg
aatgggaagaagcaggccctggttctgtttgaaactgaggagcaggctactgaagccctt
gtgtgcaagcatgctacctcagtttctgggtccataatccggatttccttttcccagtta
caggctatataa
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