Quercus lobata (valley oak): 115975553
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Entry
115975553 CDS
T07350
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03430
Mismatch repair
qlo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115975553
03460 Fanconi anemia pathway
115975553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115975553
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
115975553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
115975553
NCBI-ProteinID:
XP_030952235
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All DBs
Position
2:complement(39124074..39177070)
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AA seq
738 aa
AA seq
DB search
MEFETHCDTKAVAEAEVPKEPPKIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDAHS
SSINVVVKDGGLKLIQVSDDGHGIRYDDLAILCERHTTSKLSTFEDLQSIKSMGFRGEAL
ASMTYVAHVTVSTITKGQLHGYRVSYRDGVMEHEPKPCAAVKGTQIMVENLFYNMTARRK
TLQNSANDFSNIEDLLKRFSIHHINVNFSLRKHGASGADLNTVGTSSRLDAIRSVYGVSV
ARTLITIETSDNNPSSSVFKMNGFISDSNYVAKKITMVLFINDRLVDCTALKRAIEIVYA
ATLPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQEVIIAKIQSVVESKLRNSNEAQ
TFQEQIVEPSPSGNIGIIKDSSFSSSPSGSKSQKVPVHKMVRTDSLDPAGRLHHYLQAKP
RGPLENNPSLTAVRSSVRQRRNQKETADLTSIQELINEIDCNCHSGLLDVVRHCSYIGMA
DDVLALLQHDTHLYVVNVVNLSKELMYQQVLRRFSHFNAIQLSDPAPLSELIMLALKEED
LDPECNENDDLIEKITEMNTELLKQKAEMLEEYFSIHVDVHGNLSRIPVILDQYTPDMDR
VPEFVLCLGNDVDWEDEKMCFQVISAALGNFYAMHPPMLPNPSGDGLQYYKKRKPLRNPE
DEENTSNNIEDDVTIEDEMEHELLSEAETAWAQREWSIQHVLFPSMRLFFKPPASMATNG
TFVQVASLEKLYKIFERC
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaaacccattgcgacactaaggctgtggctgaggctgaagtaccaaaagag
cctccgaaaatccaccgcctggaagagtcggtggtgaaccgaatcgcggcgggagaggtg
attcagcggccagtatcggccgtgaaggaactggtggagaacagcctcgacgcccactcc
tcctccataaacgtcgtcgtcaaggacggtggcctcaaacttatccaagtctccgatgac
ggccacggaatccgatacgatgacttggcgatcctatgcgaaaggcacacgacgtcaaag
ctttctacattcgaggatttacaatcgataaaatcaatgggtttcagaggagaggctctg
gctagtatgacttatgtcgctcatgttactgtctccaccattaccaaaggtcagctccat
ggttacagggtatcttatagggatggtgtcatggagcatgagccaaagccgtgtgctgct
gtaaaaggaactcagataatggttgagaatctattttacaacatgactgctcggaggaag
acactacaaaattctgctaatgatttttcaaatattgaagacttgctaaagcggttttcc
attcatcacatcaatgtgaatttctcattacgaaagcatggagcttctggagcagacctt
aacacagttggtacatcatcaaggcttgatgctattcgatcagtttatggggtgtcagtt
gctcgaactcttatcacaatagaaacttcagacaataatccatcaagttcagttttcaag
atgaatggtttcatctctgattcaaattatgttgcaaagaagataacaatggtccttttt
atcaatgatagattggtagattgcactgctttgaagagagctattgaaattgtttatgct
gcaacactgcccaaagcatcaaaacccttcatatatatgtcaatcgtattgccacctgag
catgttgatgtgaatgtgcacccaactaagagagaggtaagccttttaaatcaagaagtt
attattgcgaagatacagtcagtggttgaatcaaaattgagaaactccaacgaggcacag
acatttcaggaacagatagtagaaccgtctccatctggtaatattggaataatcaaggat
tctagtttcagctcctcaccatctggttcaaaatcacaaaaagttcctgtgcataaaatg
gttagaacagattcattggatcctgctggaaggttgcatcactacttgcaagctaagcct
cgtggaccacttgaaaacaatcctagtttgactgctgtgaggtcttctgtaagacaaaga
aggaaccaaaaggagacagcagatcttaccagcattcaggagctgattaatgaaattgat
tgcaattgtcattctggtctactggatgttgtaagacactgctcgtacattggaatggca
gatgatgtcttggcattgcttcagcatgacactcatctctatgttgtaaatgtggtgaac
ttgagcaaagagcttatgtaccagcaagttctgcgccggttttcccattttaatgcaata
caattaagtgatccggcccctttgtctgagttgattatgttggcattgaaagaagaggat
ttggatcctgaatgcaatgagaatgatgacttaatagagaaaattacagaaatgaatact
gaattgctcaagcaaaaggctgaaatgttggaggagtatttcagcattcatgttgatgta
catgggaatttgtctagaattccagtcatacttgaccagtacacacctgacatggatcgt
gttcctgaatttgtactttgtttgggcaatgatgttgactgggaggatgaaaaaatgtgc
tttcaagtaatttcagctgctctaggaaacttctatgcgatgcatcctcctatgttacct
aacccatcaggtgatggtttgcagtactacaaaaagagaaaacctctcaggaatcctgaa
gatgaagaaaacacctctaacaatattgaggatgatgtcacaattgaagatgaaatggag
catgaactactttcagaggcagagactgcatgggcccaacgtgaatggtcaatccagcat
gtcttatttccatccatgagactctttttcaagccacctgcttccatggctacaaatgga
acctttgtgcaggtagcttcactggagaagctgtacaagatttttgaaagatgctga
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