Quercus lobata (valley oak): 115975583
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Entry
115975583 CDS
T07350
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04120
Ubiquitin mediated proteolysis
qlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115975583
04120 Ubiquitin mediated proteolysis
115975583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115975583
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115975583
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
U-box type E3
115975583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
115975583
NCBI-ProteinID:
XP_030952287
UniProt:
A0A7N2QZ35
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All DBs
Position
2:complement(39603581..39612615)
Genome browser
AA seq
1037 aa
AA seq
DB search
MATPTTARKPQRSPEEIEDIILRKIFLVSLTDSESSDPRIVYLELTAAEILSESKELRLS
RDLMERILIDRLSASATAEPPFQYLVGCYRRAYDESKKISSMKDPNLRSQLDSVIKQAKK
LCVSYCRIHLGNPELFPNNEVKSGTSPLLQLVFSEVSSSLDGFGGSSSGGTQSLPGFLDE
FFRDSDFDTLDPILKGLYEDLRGTVIKVSALGNFQQPLRALLYLVNFPVGAKSLVNHLWW
IPKGIYLNGRVIEMTSILGPFFHVSALLDDSIFKTQPDVGQQCFSEASTRRPADLLSSFT
TIKTVMNSLYDGLSEVLLSLLKNTDTRENVLDYLAEVINLNSSRAQIQVDPLSCASSGMF
VNLSAVMLRLCDPFLDANLTKRDKIDPKYVFHNNRLDLSGLTALHASSDEVAEWLNKKKL
GKTDGSTQHTDGENRLLQSQKATSSGSSASGSSNVKSASSSDKTKYPFICECFFMTARVL
HLGLLKAFSDFKHLVQDIQRCEDTLSTLKAMQEQTPTPALERDISRLEKEIELYSQEKLC
YEAQILRDGTLIQSALSFYRLMVVWLVGLVGGFKMPLPSSCPMEFASMPEHFLEDAMELL
IFASRIPKALDGVLLDDFMNFIIMFMGSPDFIRNPYLRAKMVEVLNCWMPRRSGSSNTAT
LFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWR
QIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQER
TRLFQSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQ
RKSLSLKDPEKYEFRPKQLLKQIVCIYVHLAKGDTENIFPAAISKDGRSYNEQLFSAAAD
VLRRIGEDGRVIQKFIELGAKAKVAASEAMDTEAVLGEIPDEFLDPIQYTLMKDPVILPS
SRITVDRPVIQRHLLSDNSDPFNRSHLTADLLIPNTELKARIEGFIKSQERKKQGESLSM
ESAKVTIQTTNSEMLID
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcctactactgctcggaaaccccaaaggtctccggaggaaatcgaagacatt
atcctccgtaaaatcttcctggtttccctcaccgattctgaatcctccgatcctcgaatc
gtgtacctggagctaaccgcggctgagattctaagcgaaagcaaggaattaaggctctct
agggatctcatggagcgaatcctaatcgatcgcctctccgcttctgccaccgccgaaccc
ccctttcaatacctcgtcggttgttatcgtcgcgcttacgatgagtccaagaagatttct
tccatgaaagaccccaatctcaggtcccaattggactctgtcattaagcaagccaagaaa
ttgtgcgtctcttactgtaggatccacttgggaaaccctgaattgtttcccaataatgag
gttaaatccggtacttcccccttgttgcagctggttttttctgaggtttccagctctctc
gatggctttggaggcagtagcagtgggggtactcaatccctacctggctttttggatgag
ttcttcagggattcggatttcgatacgttggaccccattttgaagggcttgtatgaagat
ttgaggggcactgtcattaaggtttcggccctcggaaactttcaacagcctttgagggct
ttgttgtacttggttaactttcctgtgggtgccaagtccttggtgaatcatctttggtgg
attcccaaaggcatttatttgaatggccgggttattgagatgaccagcattttggggcca
ttttttcatgttagtgctctgcttgatgattctattttcaagacccagcctgatgttggg
cagcagtgcttttcagaagcatcaactcgtcgaccagctgatttgttatcttcatttacc
acaattaaaacagttatgaatagtttatatgatggcctgtcagaagttcttctctcgctt
cttaaaaatacagacacccgtgaaaatgttcttgattatcttgctgaggttatcaattta
aactcgtcaagggcacaaattcaggttgatcctctatcttgtgcaagttcaggcatgttt
gttaatctcagtgctgtcatgcttcggctgtgtgacccttttttggatgcaaacttaacg
aaaagggataaaattgatcccaaatatgtgtttcataataaccgtctggatttaagtggg
ttgactgcactccatgcatcatcagacgaagttgctgaatggcttaataaaaaaaaattg
gggaaaactgatggctccacacaacatactgatggtgaaaatcggttactacaatctcaa
aaagccaccagttctggcagtagtgccagtggatcttctaatgtgaagtcagcatcaagt
agtgataaaactaagtacccatttatttgtgaatgcttctttatgactgcaagggtgcta
cacctgggcttattaaaagcattttctgactttaaacatttagttcaggacattcaaagg
tgtgaagatactctctccactcttaaagccatgcaagagcagactcctactcctgcattg
gagcgggacatttctcgccttgagaaagaaatagagttgtattcacaggagaagctttgt
tatgaagctcagatactaagggatggaacacttattcagagtgccctttctttctaccgg
ttaatggtggtttggctggttggcttggttggtggatttaagatgcctctgccatcaagt
tgccccatggaatttgcgtctatgccagagcattttctagaagatgccatggaattgctt
atatttgcttcacgaatcccaaaagccttggatggggtcttgctggatgactttatgaac
tttattatcatgttcatggggagcccagattttatcagaaacccttatctcagggcaaag
atggttgaagtcctgaactgctggatgccccgtagaagtggctcatctaatacggcaact
ctatttgaagggcaccaactatctcttgagtatcttgtgaggaatcttctgaagctttat
gttgacattgagttcactggttctcacacacagttctatgacaagttcaacatccgacat
aatattgctgaacttcttgaatacctgtggcaagtccctagtcatcgtaatgcttggaga
cagattgccaaggaagaggaaaagggagtttatctgaatttcttaaacttccttatcaat
gatagcatctatcttcttgatgaaagtctcaacaaaattcttgaactcaaagagttggaa
gctgagatgtccaatactgcagaatgggagcgaagaccagctcaagagaggcaggagagg
acccggctattccaatcccaagagaatattatccggattgatatgaagttggcaaatgag
gatgttagcatgctggcatttacttcggagcagattacggctcctttcctacttcctgag
atggttgagagagtagccagcatgctcaattattttctgttacagctagtgggcccccaa
agaaaatctctttcccttaaagatcctgaaaaatatgaatttcgtccaaaacagttgctt
aagcagattgtctgcatatatgttcatctggcaaagggcgatacggagaacattttcccg
gctgccatttctaaggatggtcgatcatacaatgagcagttatttagtgctgcagcagat
gttcttcgaagaattggtgaagatgggagggtaatacagaaatttattgagctaggtgcc
aaggccaaagttgcagcttctgaggcaatggacactgaagctgttcttggggagatacct
gatgaatttctcgacccaattcagtacactctgatgaaggatccagttatattaccttct
tcaaggatcactgtagaccgacccgtcattcaaaggcatcttcttagtgataattcggac
ccttttaaccggtcacatcttacggcggatctgctgattccaaacacggaattgaaggca
agaattgaaggttttatcaagtcccaagaaaggaagaagcaaggggaaagtcttagcatg
gaaagtgctaaggtgacaatacaaacaacaaacagtgagatgttaattgattga
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