Quercus lobata (valley oak): 115975715
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Entry
115975715 CDS
T07350
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115975715
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115975715
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
115975715
NCBI-ProteinID:
XP_030952474
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Position
2:46981155..46993293
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AA seq
466 aa
AA seq
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MATTEATQNGSTTATQSDPQTVPSEPTTATTATEPEPEPEPEPESEPINPDLESESPSAD
KKWPGWPGDCVFRLIVPVLKVGSIIGRRGDLIKKMCEETRARIRVLDGALGTPDRIVLIS
GKEEPEAALSPAMDAVIRIFKRVSGLPENEGGDGKTSGAAGLAFCSIRLLVASTQAINLI
GKQGSLIKSIQESTGASVRVLSGDEVPFYVATDERIVEVQGETLKVLKALEAVVGHLRKF
LVDHSVLPLFEKSYAAPAPVSQDRIVDTWPDKSLLHSASQTAIPTDYPLSMSTKKDSLFL
DRETRLESQLSATGISLYGQDPTISGIRSSGLGRTGAPIVTQITQTMQIPLSYAEAILGT
KGTNIALIRRSSGAFLTVQESRGLPDEITVEIKGTSSQVQTAQHMIQEAINSHNEPVTSS
YGGLDSGLRYSYSQLGSTSYPSSSFSSQSYGGYGSSSLGGYSAFRL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccactgaagctacccagaacggctccacgaccgctacacagtccgaccctcaa
acagtcccatccgaacccaccaccgctacaacagcaaccgaacccgaacccgaacccgaa
cccgaacccgagtccgagccaataaatccggatttggagtcggagtctccatccgccgac
aagaaatggccgggttggccaggtgactgtgtgttccggctgatagttccagtcctcaaa
gtgggtagcatcatagggcgcagaggcgatctcatcaagaagatgtgcgaagaaacccgc
gctcgcattcgcgtcctcgacggggcccttggcactcctgatcgcattgtgctgatatcg
ggaaaggaagagccagaggctgctctctcgcctgcaatggatgcggtaatacggattttc
aaaagggtctctggattacctgagaatgagggtggtgatggtaaaacatcaggagctgct
ggtttggcgttttgttctattcgtttattggtggcatccacacaagccattaatttgatt
ggaaagcaaggctcgttaattaagtctatacaggagagtaccggtgcttctgtcagagta
ttgtccggagatgaggtgccattctatgttgccacagatgagaggattgtggaagtgcag
ggagaaactttgaaggttctcaaagctctagaagcagtagtgggtcaccttaggaagttt
ttggttgatcatagtgttcttccactgtttgaaaagagttatgctgcaccagcgcctgtc
tcacaagatcgcatagttgatacctggccagacaagtccttactgcatagtgcttctcaa
actgcaattcccactgattatcctctctcaatgtccacaaagaaggattctctattccta
gatcgtgaaactcgtttggagtctcaactctcggccactggaatttcactctatggacaa
gatcctacaatttctgggattcgttcttcaggacttggtcgtactggtgctcctattgtt
actcagattacacaaacaatgcaaatcccattatcttatgctgaggctatccttgggact
aaagggaccaatattgcactcattcgtcgtagtagtggagcattcttaaccgtgcaagag
agcaggggactacctgatgaaattactgtggaaattaaaggaacctcatcgcaggttcag
acagctcaacatatgattcaggaagctataaatagtcacaatgaacccgttacaagcagc
tatggaggtctagattctggtttgaggtattcctactctcagttgggcagtacatcttac
ccttcatcttcgttttcctcacaatcatatggtgggtatggatcttcgagtttaggaggc
tacagtgctttcaggctttga
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