Quercus lobata (valley oak): 115975734
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Entry
115975734 CDS
T07350
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115975734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115975734
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115975734
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
115975734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
115975734
NCBI-ProteinID:
XP_030952500
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All DBs
Position
2:complement(48459270..48472341)
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AA seq
384 aa
AA seq
DB search
MAKFSVGGEEDGEGPSSSPRPKRLRISVQTNFVDQNDPQRLQQQEQEEGDDESYEEEDEE
EEGEEEAASYDDEEDDTEEEEIEEVEEDEEEEEAQQGNQGSDVTVGPRSTIGNDGHVIHV
GDGSISVTLTDPEVLDCSICLEHLSPPVFQCENGHIACSSCCNKLKNKCPSCFWPIGYNR
CRAIEKVLEAVKIPCQNSKYGCKEVVSYSRKSDHEKTCIYAPCSCPLSHCKFIASSKQIY
VHFSSKHKNSAIGFKYDSNFSVSLTLTDKFLVLQEQSNGVLFVLNNCVDHRGNAVTINCV
GPSSTTGGFSYGLAVKTQGSSLRLESFTKNSQHRVDSPPSTGFLLIPTDFFGSCGQLKLE
VYIKRSATCGITSFGIARGRIGPV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttctcggtgggtggagaagaagatggggaaggccccagcagtagtcccagg
ccaaaacgactccggatctctgtccaaaccaactttgtggaccaaaatgacccacaacgc
ctacaacaacaagaacaagaagaaggagacgatgaaagttacgaagaagaagatgaagaa
gaagaaggagaagaagaagcagcctcttatgacgatgaagaagacgacactgaagaagaa
gaaatcgaagaagtagaagaagatgaagaagaagaagaagcacaacaaggaaaccaaggt
tctgatgtcactgtgggacccagatccaccattggtaatgatggccacgttattcatgtg
ggtgacggttccatttccgtgactctcactgatcccgaagtcctcgattgctctatttgc
ctggagcatttgtcccctcctgtctttcagtgtgagaatgggcatatagcttgctcttcc
tgctgcaacaaacttaagaataaatgtccctcctgcttttggcctattggctataaccgt
tgccgagccattgagaaggttctagaagcagtcaaaattccgtgtcagaattctaagtat
ggttgcaaagaagtggtttcttacagtaggaaaagtgaccatgagaagacatgtatatat
gcaccttgttcatgccccctttcacattgcaaattcattgcttcatccaagcagatatat
gttcatttcagtagcaagcataaaaattctgcaataggcttcaaatatgattccaacttc
tctgtgtccttaactcttactgacaaatttcttgtcctccaagaacagagcaacggtgtt
ttgtttgttcttaataattgtgttgaccatcgtgggaatgcggtgacaattaattgtgtt
gggcccagctcaacaacaggagggttctcctatggtcttgcagtaaaaactcaaggaagc
tctctccgattagaatctttcacaaagaacagtcaacatcgggttgatagtcctccttca
acaggatttcttctaattccaactgatttttttggttcttgtggccagctcaagttggaa
gtctacattaagcgtagtgctacatgtggcattacttcttttgggattgcccgaggaaga
attggtcctgtttaa
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