Quercus lobata (valley oak): 115975816
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Entry
115975816 CDS
T07350
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03420
Nucleotide excision repair
qlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115975816
09124 Replication and repair
03420 Nucleotide excision repair
115975816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
qlo03051
]
115975816
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115975816
Proteasome [BR:
qlo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115975816
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115975816
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
CUE
NQRA_N
UBA_RAD5A
Rad60-SLD_2
UBA_3
Dsc3_N
TECR_N
Permuted_GreAB-C
TFIIA
Motif
Other DBs
NCBI-GeneID:
115975816
NCBI-ProteinID:
XP_030952675
UniProt:
A0A7N2KXH9
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All DBs
Position
2:complement(51984505..51992051)
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AA seq
389 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDSISDVKKSIETVQGSDVYPAAQQMLIHQGKVLKDGTTLE
ENKVAENSFVVIMLTKSKVSSSGTSSTAAAPTSQAQPASNSPPTVTNTSPPTVTQPPPAS
QPPAPTAAPPPSVPEPTPVAAPPASSESDVYGQAASNLVAGSTLETTVQQILDMGGGSWD
RDTVVRALRAAFNNPERAVEYLYSGIPEPAEVPQVAQAPVSGQAVNPPAQAPQPAVPASG
PNANPLDLFPQGLPAVGSNAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP
HLMRLIQEHQADFLRLINEPVEGEGNLLGQVPSGMPQAVTVTPEEREAIERLEAMGFDRA
IVLEVFFACNKNEELAANYLLDHMHEFED
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtgaagactctcaagggtactcacttcgagatcgaagtgaaacccgaa
gactcgatttctgatgtcaagaaaagcatagagacagttcagggttctgatgtttaccct
gccgcgcaacagatgcttattcatcaggggaaagttcttaaggatggcacaacgctagaa
gaaaataaagttgcggagaacagttttgttgtcatcatgttaacaaagagtaaggtctca
tcaagtggaacctcaagtacagcagctgcacccacaagccaggctcaacctgcaagtaat
tcccctcctactgtgacaaatacttcccctcctaccgtgacacaaccaccacctgcttct
caacctcctgccccaactgcagcaccgcccccttctgtccctgaacccactcctgttgca
gcccctcctgcttcttcagaatcagatgtctatggccaagcagcatcaaatcttgttgca
ggaagtactttagagactaccgttcaacagattctagatatgggtggaggaagctgggac
cgagacaccgttgtccgtgctttacgtgctgcttttaacaaccctgaaagagccgttgaa
tatctttattctggaattcctgagccagctgaagttcctcaagttgctcaagctcctgtt
agcgggcaggcagtcaaccctccagcccaggctccacaaccagcagtacctgctagtggg
cccaatgcaaacccactagatctgtttccacagggccttcctgctgtgggttcaaatgct
ggtgcaggcaccttggatttcttacgtaacagtcaacagttccaagccttgcgagctatg
gttcaagcaaatccccaaatattgcagcctatgcttcaggaactaggaaagcaaaatcca
cacctaatgcgccttatccaggagcatcaggctgacttcttacgcctgataaatgaacct
gttgaaggagaagggaacctactcggtcaggtaccttcaggtatgccacaggctgtgact
gtcacacctgaggagcgtgaggccattgaacgtcttgaagcaatgggctttgatcgagca
attgtattggaggttttctttgcatgcaacaagaacgaagagctggcagctaactatctc
ttagatcatatgcatgagtttgaagactga
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integrated database retrieval system
