Quercus lobata (valley oak): 115975818
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Entry
115975818 CDS
T07350
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03420
Nucleotide excision repair
qlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115975818
09124 Replication and repair
03420 Nucleotide excision repair
115975818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
qlo03051
]
115975818
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115975818
Proteasome [BR:
qlo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115975818
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115975818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
UBA_Ucp12
CUE
UBA_RAD5A
UBA_3
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
115975818
NCBI-ProteinID:
XP_030952677
LinkDB
All DBs
Position
2:complement(52013068..52024390)
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AA seq
413 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDSLRVAIFGISPFDVLWMIEWAQGKGVADVKKSIETVQGS
DVYPAAQQMLIHQGKVLKDGTTLEENKVAENSFVVIMLTKSKVSSSGTSSTAAAPTSQAQ
PASTSPPTVTNTSPPTVTQPPPASQTPAPTAAPAPSVPEPTPVAAPPASSESDVYGQAAS
NLVAGSTLETTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEPAEVPQAT
QAPVSGQAVNPPAQAPQPAVPASGPNANPLDLFPQGLPAVGSNAGAGTLDFLRNSQQFQA
LRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGEGNLLGQVASGMP
QAVTVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtgaagactctcaagggtactcacttcgagatcgaagtgaaacccgaa
gactcgcttcgagtggcaatctttggaatttctccctttgatgttttgtggatgattgag
tgggcccaagggaaaggggttgctgatgtcaagaaaagcattgagacagttcagggttct
gatgtttaccctgctgcacaacagatgcttatccatcaggggaaagttcttaaagatggc
acaacgctagaagaaaataaagttgcggagaacagttttgttgtcatcatgttaaccaag
agtaaggtctcatcaagtggaacctcaagtacagcagctgcacccacaagccaggctcaa
cctgcaagtacttcccctcctaccgtgacaaatacttcccctcctaccgtgacacaacca
ccacctgcttctcaaactcctgccccaactgcagcaccggccccttctgtccctgaaccc
actcctgttgcagcccctcctgcttcttcagaatcagatgtctatggccaagcagcatca
aatcttgttgcaggaagtactttagagactaccgttcaacagattctagatatgggtgga
ggaagctgggaccgagacaccgttgtccgtgctttacgtgctgcttttaacaaccctgaa
agagctgttgagtatctctattctggaattcctgagccagctgaagttcctcaagctact
caagctcctgttagtgggcaggcggtcaaccctccagcccaggctccacaaccagcagta
cctgctagtgggcccaatgcaaacccactagatctgtttccccagggccttcccgctgtg
ggttcaaatgctggtgcaggcaccttggatttcttacgtaacagtcaacagttccaagcc
ttgcgagctatggttcaagcaaatccccaaatattgcagcctatgcttcaggaactagga
aagcaaaatccgcatctaatgcgtcttatccaggagcatcaggctgacttcttacgcctg
ataaatgaacctgttgaaggagaagggaacctactcggtcaggtagcttcaggtatgcca
caggctgtgactgtcacacctgaggagcgtgaggccattgaacgtcttgaagcaatgggc
tttgatcgagcaatagtattagaggttttctttgcgtgcaacaagaatgaggagctggca
gccaactatctcttagatcatatgcatgagtttgaagactga
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integrated database retrieval system
