Quercus lobata (valley oak): 115975820
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Entry
115975820 CDS
T07350
Name
(RefSeq) KH domain-containing protein At4g18375-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115975820
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115975820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Peptidase_C26
Motif
Other DBs
NCBI-GeneID:
115975820
NCBI-ProteinID:
XP_030952682
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Position
2:complement(52257136..52293353)
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AA seq
698 aa
AA seq
DB search
MDGNKRNFFNKRPNIQFKKKGNNRKGKWNNSSREQSLGNSESVDTVYRILCPSKKIGGVI
GKGGSIVRALREETQAKITVADSVVGADERVIIIYSSPNKLSRNQNDEEDSAGENELEPM
EPHCAAQDALLKVHDRIIEEDLFGGMTFEDDNENNVVTTRLLVPNFMVGCLLGKRGDVIQ
RLRSETGANIRVLSADHLPTCAMSTDELVQISGKRDVAKKALYDVSTLLHQNPRKDKPPL
TFPMPFGGQGFHPPGAPLPNMLPPGNPMWSHWNSDSHGVPPMPWMGGYGNRPSEFVPGGF
NGVPPGPVAEASAEFFMKILCSAGKIGGVIGKGGFNVRQLQQETGAGIYVQEASTNSDER
VIRVSAFEWWIIALMLFQAIWNQRSQTIEAILQLQNKVSEYSEKGNIITRLLVPSSKVGC
ILGQGGHVINEMRKRTQADIRVFSKDDKPKCAAEDEELVQVSGNFGVAKDALAEIASRLR
VRTLRDANAAAESAPVGPSQGLRPAGSIPGGGLPQSGTMGAGSSGRYDPLKVEGYEYEPQ
SYPVPRAATGYPNVNSASDVKIPSSAVSSVIGSGGSNISNVGEVVGARVKLQNSHAGGFG
CAVDIRGSSEHLNAAQSILQAFMASGGQNVNSQNYQNMNAQQGSYQNMNAQQSYQGSYQN
MNAQQSPYQSSGQQGSYPNINVPQGAYHNISAQQSYQY
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaacaagcgaaattttttcaataaacgccccaacatccaatttaagaagaaa
ggaaataacaggaaaggtaaatggaataattcaagccgtgaacagtctttagggaattct
gagtctgttgacaccgtctaccgtatactctgcccctctaaaaaaattggtggtgttatt
gggaaaggtggcagcatagtcagagccctaagagaagagacacaggcgaagattacagtt
gccgattctgttgttggagctgatgagagagtaattattatctatagttctcctaacaaa
ctttcaaggaaccaaaatgatgaagaagattcagctggggagaatgagttggagcccatg
gagcctcattgtgcagcccaggatgctctcttaaaagttcatgacaggattattgaggaa
gatctctttggtggaatgacatttgaagatgataatgagaacaatgttgtcactacacga
cttctagttccaaatttcatggtaggatgtcttcttggaaaacgtggagatgttattcaa
agattgcgaagtgagacaggtgcaaatattcgtgttctttctgcagatcatcttcctaca
tgtgctatgagcactgatgaattggtacagatatctggaaaacgagatgtggcaaagaag
gcactttatgatgtatcaactctgttgcatcagaatccacgcaaggataaacctcctctg
actttccctatgccttttggaggccaaggatttcatccccctggagctcccttgcctaat
atgcttccacctggaaatccaatgtggtcccattggaactctgattcccacggtgtgcca
ccaatgccatggatggggggatatggaaaccggccttctgagtttgtaccagggggtttc
aatggcgttcctcctggacctgttgctgaagcttcagctgagttctttatgaaaattctt
tgttcagctgggaaaattggtggggtgattggcaagggaggttttaatgtaagacagtta
cagcaggaaacaggagccggtatatatgttcaagaggcatcaaccaattcagatgaacgt
gtgattcgggtctctgctttcgagtggtggatcattgcccttatgttgtttcaggctatc
tggaaccagagatcacaaaccattgaagcaattcttcagcttcagaataaagttagtgaa
tactctgaaaaaggtaatatcattactaggcttcttgtcccgtcaagtaaggttggttgc
attcttggacaaggaggtcatgttatcaatgagatgcgaaagagaacccaggcagacatt
cgtgttttctctaaagatgacaagcctaagtgtgcagctgaagatgaagagcttgtgcag
gtatctggaaattttggtgttgctaaagatgcattggcagagattgcatcaagactcaga
gtgagaactctgcgagatgcaaatgctgctgcagaaagtgctcctgttggtccttcccag
ggacttcgtcctgcaggaagcatacctggtggagggctcccacaatctggcacaatggga
gccggtagctctggtagatatgatcctctaaaggttgagggatatgaatatgaaccacag
agctatccagttccaagagctgctactggatacccaaatgtcaatagtgcttcagatgtc
aagattccaagtagtgcagttagttcggttattggatcaggagggagcaacatttccaat
gttggtgaggttgttggggcaagagtgaagcttcaaaactctcatgctggtggcttcgga
tgtgctgttgacatccggggttcttctgagcacttgaatgcagcacagagtatccttcag
gccttcatggcttctggtggacaaaatgtgaattctcagaactaccagaatatgaatgct
caacaaggctcctaccagaacatgaacgctcagcaaagctaccaaggctcctatcaaaac
atgaatgctcagcaaagcccctatcaatcaagtggccagcaaggatcgtaccccaacatc
aatgtaccgcagggtgcttaccacaacatcagtgcccagcaaagctaccagtactaa
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