Quercus lobata (valley oak): 115975934
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Entry
115975934 CDS
T07350
Name
(RefSeq) nijmegen breakage syndrome 1 protein-like
KO
K10867
nibrin
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115975934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qlo03032
]
115975934
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115975934
DNA replication proteins [BR:
qlo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
115975934
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
115975934
BRCA1-C complex
115975934
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Nbs1_C
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
115975934
NCBI-ProteinID:
XP_030952851
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All DBs
Position
2:56506708..56524818
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AA seq
563 aa
AA seq
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MVWALFPVDPVSGEDKYYIFARGTYKVGRKGCDVIINKDKGVSRIHAEIVVDALNSLNPL
NKRPFNTLSKVRIRDCSKYGTFINKNLGQKEKVHELPNKETTLEDGDLVSFGTGNATYRF
CFVPLIFFVCSESSQVNQPLQDKISAIGAHITHSLAQECTHVLVDQLRPVKEDVLDAIVS
KKPIVLSSWVEFVAEKNIRTEIPSCSSYAPMLTVEGESIKVADPKSRENCLEGYTFLLEE
TNMYKFRDRLQSLLEVGGAKIVSVSGFCSSSQDLEYGDNNRMVCVIPGGSTEQSDQLKKL
SSFSRVNEMDLIRAVLTGWLNPSFLISACILVSSSCSTDETVVADSDLEGETATSIQENV
TGCTDEAIKVVSKAETSMASEEPIKFVSKDEVIKVVSKAETSMVSEEAVKFVNETETVMD
HAAIKSKDICGTSYRDVSCGITVKIDKGDESECGNSDILFSQDLVVRDTNIPSRFSTTTN
NGVLNFKRFRKTNTQSGNSFNNLIPFSKHPYKDSDDGNEEMVESVKEEKKRKQMEAIAED
LFNNEKGRKRGVAGSLRGLLTRG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggctctctttcctgtagaccctgtctcaggtgaagataagtactatatattt
gcaaggggaacttacaaagttggtcgcaaaggttgtgacgtaattattaacaaagacaaa
ggagtttctcggatccatgcagaaatagttgttgatgcactgaattctttgaatcccctg
aataaaagacctttcaacactttgtctaaagttaggattagagattgctccaaatacgga
acattcattaacaagaatctggggcaaaaggaaaaagttcatgagctcccaaataaggaa
acaactttagaagatggggacctggtttcttttggaactggtaatgcaacctacaggttt
tgttttgttcctctcatattttttgtctgctcggagtcctcccaagtgaatcagcccctt
caagacaaaatttcagcaattggagctcatattactcacagcctggctcaagagtgcaca
catgtgcttgttgatcaactcaggccagtgaaagaagatgtgcttgatgccattgtatca
aaaaaacctattgttcttagtagttgggttgagtttgttgcagaaaagaacattcgcact
gaaattcctagctgcagttcctatgctccaatgttgacagtagaaggagaatcaatcaaa
gttgcagaccctaaatctcgtgaaaactgtttggaaggatatacttttttattggaagag
acaaacatgtacaagttcagggatcggttgcagtccttattggaagtgggtggtgcaaag
attgtttctgtatcaggcttttgttcaagtagccaagacttggaatatggagataataat
cgtatggtttgtgttatccctggaggatcaacagagcagtctgatcaactcaaaaaactc
agttcgttctcgcgagtaaatgagatggatttaatacgtgctgttttaactggatggctg
aatccatcctttttgatatcagcatgcatacttgtttcatcttcgtgctccacagacgaa
acagtggtagcagattctgatttagagggggaaacggccacatcaattcaggaaaatgtc
acaggctgcactgatgaagccattaaagttgtgagcaaagctgaaacatccatggcttct
gaagaacccattaaatttgtgagcaaagatgaagtcattaaagttgtgagcaaagctgaa
acatccatggtttctgaagaagccgttaaatttgtgaacgaaactgaaacggtcatggat
catgctgccatcaaatcaaaggatatctgtggtacaagctacagagacgttagttgtggt
attacagtcaaaatagacaagggtgatgagtctgaatgtggaaattcagatatacttttc
agccaagatttagttgtgcgagatacgaacataccttctcgcttcagtacaaccacaaac
aatggagttctaaatttcaaacgcttcagaaagacaaatactcaatctgggaatagcttc
aacaatctaattccattttcgaagcacccatataaagattctgatgatgggaatgaggaa
atggttgagtctgtaaaagaagagaaaaagcgaaagcaaatggaagctattgcagaggac
ttatttaacaacgagaagggaaggaagcgtggtgtagctggttctcttcgtgggcttctt
actcgtggttag
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