Quercus lobata (valley oak): 115976110
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Entry
115976110 CDS
T07350
Name
(RefSeq) zinc finger CCCH domain-containing protein 64 isoform X1
KO
K24939
CWF19-like protein 1
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115976110
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115976110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf_CCCH_4
zf-CCCH_4
zf-CCCH
Torus
zf-CCCH_3
zf-CCCH_10
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
115976110
NCBI-ProteinID:
XP_030953074
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All DBs
Position
2:complement(62541922..62548740)
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AA seq
606 aa
AA seq
DB search
MAPPRILLCGDVLGRLNQLFKRVSSVNKAAGPFDALICVGQFFPDSPEQLGELTDYIEGR
SQVPLPTYFIGDYGIGAAKHLLSASKDSANLGFKMDGLKVCQNLFWLKGSGKFNLHGLSV
AYLSGRHFSDGQQFGTYTQDDVDALRAIAEDPGIFDLFLTNEWPSGVTNRASTSDLPHGF
SDSPGSDSTIAELVAEIKPRYHIAGTKGIFYAREPYSNVDAVHVTRFLGLASVANKEKQK
FIHAISPTPASTMSAVEISTKPLNTTLSPYTYADQTVLAKEATKRPSDSDADSQYWRYDV
SQKRQKYGAGDGDRLCFKFVSSGSCPRGDKCNFQHDENAREQSLRGVCFDFLNKGRCERG
PNCNFKHSLQDEGESHSHKKRGSENASNRSRECWFCLSSLNIESHLIVSIGEYFYCALAK
GPLVQDHILIIPVEHLPNTVLLPPETEIELGRFQNSLKSYYKNQGKSVVFFEWVSKRSTH
ANLQAIPVPSSRAAAVQDIFNLAAEKLGFKFVALRKNENSDGRNVLRTQFDKDFSFFYVE
LPDGTIFSHLVEENERFPAQFGREVLAGLLNMADRADWRNCSQSKEEETKMAEDFKNQFQ
EFDPNK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctcccccaagaattctgctctgtggcgacgttctcggccgcctcaaccagctcttc
aagcgagtctcatcggtaaacaaagcggctgggccattcgatgccctaatttgcgttggc
cagttcttccctgactcgccggagcagctcggcgagctaaccgactacattgaaggccgc
tcccaagttcctctgcccacatacttcatcggcgactacggaatcggcgctgctaaacac
ctcttatcggcttcgaaggactcggcgaaccttggcttcaagatggacggtctcaaggtt
tgccaaaacttgttctggttaaaaggcagtggcaagttcaatctccatgggctatctgtg
gcatatttatctggtaggcatttttctgatggtcaacaatttggaacatacactcaagat
gatgtggatgcattgcgagctatagctgaggatcctggaatatttgacttgttcctaact
aatgaatggccaagtggggtcacaaacagagcatctacatctgatcttccccatgggttt
tcggattcacctggaagtgattctaccatagcagagttagtagcagagattaaaccacgc
tatcacattgcaggtactaaaggtatattctacgctcgtgaaccttactccaatgttgat
gctgtgcatgtgactcgcttcttgggtcttgcttctgttgccaataaagagaagcagaaa
tttattcatgcgatttctcctactccagcatctaccatgtcagctgttgagattagcacg
aagcccctaaacactaccttatctccatatacatatgcagaccaaactgttctcgccaaa
gaagcgacaaaaaggcctagtgatagtgatgctgactcacaatattggagatatgatgtc
tcacaaaaacggcagaaatatggagctggagatggtgataggctgtgttttaaatttgta
tcttctggttcttgtccacggggggacaaatgcaactttcaacatgatgagaatgcaagg
gaacaatctctgagaggtgtttgttttgattttcttaacaaaggaagatgtgaaaggggt
ccaaattgcaactttaagcacagcctgcaggatgaaggtgagagtcattctcacaagaaa
cgaggatctgagaatgctagcaacaggtcaagggagtgctggttttgtttgtcaagcctg
aacatagagtcacatctaattgtcagcataggagagtacttttactgtgcactggctaaa
ggcccgcttgttcaagatcatatactgataatacctgttgagcatttacccaatactgtt
ttgctaccaccagaaactgaaattgagcttggtaggttccagaatagtctcaagagttat
tataagaatcaagggaaatcagttgttttctttgagtgggtttcaaaacgtagtactcat
gctaatcttcaggctattcctgttccatcatccagagctgctgctgttcaagatatattt
aatttagctgctgaaaaattgggctttaaatttgtggccttgagaaagaatgagaattct
gatggaagaaacgtgttgaggacacagtttgataaggattttagcttcttctatgttgaa
ctccctgatggtacaatattttcacatttggttgaggaaaatgagagatttcctgctcag
tttggacgtgaggttctggcaggcttgctgaacatggcagacagggccgattggaggaat
tgttcccaaagcaaagaagaggaaacaaagatggcagaagattttaagaatcagtttcaa
gaatttgatccaaataagtga
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