Quercus lobata (valley oak): 115976309
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Entry
115976309 CDS
T07350
Name
(RefSeq) WD repeat-containing protein LWD1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115976309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115976309
03036 Chromosome and associated proteins [BR:
qlo03036
]
115976309
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115976309
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
115976309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
115976309
NCBI-ProteinID:
XP_030953369
UniProt:
A0A7N2KY92
LinkDB
All DBs
Position
2:68112396..68113815
Genome browser
AA seq
344 aa
AA seq
DB search
MGASSDPTQDGSDEQQKRSEIYTYEAPWHVYAMNWSVRRDKKYRLAIASLLEQFPNRVEI
VQLDDSNGEIRSDPNLSFEHPYPPTKTIFIPDKECTKPDLLATSSDFLRVWRISDDRVEL
KSLLNGNKNSDFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVY
DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII
MDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQ
PVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagtagcgatccgacccaagacggatccgacgagcaacaaaagcggtcagag
atatacacgtacgaggcgccgtggcacgtctacgccatgaactggagcgtccgccgcgac
aagaagtaccgtctagccatcgcgagcctcctcgagcagttcccaaaccgggtcgagata
gtccagctcgacgactccaacggcgagatccgatccgacccgaacctctctttcgagcac
ccctacccgccgacaaaaaccatcttcatccccgacaaggagtgcaccaagcccgacctc
ctcgccacctccagcgacttcctccgcgtttggcggatctccgacgaccgcgtcgagctc
aagagcctccttaacgggaacaagaacagcgatttctgcgggcctttgacctccttcgat
tggaacgaggctgagccgaagcgaatcgggacttcgagcattgacaccacgtgtaccatc
tgggacatcgagcgtgaagttgtggacacccaactcatcgcccacgacaaagaggtgtac
gatattgcttggggtggtgttggggttttcgcttctgtttcagctgatgggtctgttcgt
gttttcgatcttcgcgacaaggaacactcgactatcatctatgaaagctctgagcccgac
acgcctttggttcgactaggatggaacaagcaggatcctcggtacatggccactattatc
atggacagtgctaaggttgttgtgcttgacattcgctttcctacgttgcctgttgtggaa
ttgcagagacaccaagcgtctgtcaatgcgattgcttgggctccacatagttcttgccac
atctgtacggctggggatgattctcaggctttgatttgggacttgtcctctatgggtcag
cctgtcgagggtggattggatcccattcttgcttacactgccggggccgagattgagcag
cttcagtggtcgtcgtctcagcctgattgggttgccattgctttctccaccaagcttcag
atacttagggtatga
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integrated database retrieval system
