Quercus lobata (valley oak): 115976319
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Entry
115976319 CDS
T07350
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
qlo
Quercus lobata (valley oak)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
TRCF
T1R_D3-like
DUF3198
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
115976319
NCBI-ProteinID:
XP_030953383
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Position
2:complement(68693527..68702781)
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AA seq
817 aa
AA seq
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MACSLLPVPDISRPLVLKKLSSSPKLWTLLGLRCPCHFKTKPSLSLTKAVYTQNFSLPLS
RDKMEPDQDPISLLNERIRRDYNRRDASRTVMDSKEAEKYIQLVKEQQQRGLQKLKGDRQ
PKKNGGFSYKVDPYSLRSGDYVVHKKVGVGRFVGIKFDVPKDSPNPVEYVFIEYADGMAK
LPLTQASRLLYRYNLPNETKRPRTLSKLNDTTVWERRKTKGKVAIQKMVVDLMELYLHRL
KQRRPAYPKSPFMAEFEAQFPYEPTPDQKQAFIDVGKDLTERETPMDRLICGDVGFGKTE
VALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVISERFSMYPETKVGLMSRFQTKAEKEEH
LHMIKNGQLDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLS
ATPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSAYSKENVISAIKYELDRGGQVFYV
LPRIKGLEEVMEFLEQSFPTVEIAIAHGKQYSKQLEETMEKFAQGEIKILICTNIVESGL
DIQNANTIIVQEVQQFGLAQLYQLRGRVGRADKEAHAHLFYPDKSLLTDQALERLAALEE
CRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHCVISVP
YQSVRVDININPHLPSEYINYLENPMEIINEAEKAAEKEIWSLMQFTENLRRQYGKEPYS
MELLLKKLYVRRMAADLGIKRIYASGKMVGMKTNMTKLVFKLITESMVSDVHRNSLVLED
DLIKAELLLELPREQLLNWIFQCLAELHASLPALIKY
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttctcttctcccagtacccgacatttccaggcctctggttttgaagaagctc
agctcatctccaaagctatggacactgttgggtctcaggtgtccttgccacttcaaaacc
aaaccttcactttcactcaccaaagctgtctacacccaaaacttctctctccctctctcc
agagacaaaatggaacccgaccaagaccccatttctttactaaacgagaggattcgccgt
gactataacaggcgagacgcttcgagaactgtcatggactcgaaggaggccgagaagtat
attcagctggtgaaggagcagcaacagaggggcttgcaaaaactcaagggagatagacag
cccaaaaagaatggtgggttcagttacaaagtggacccttatagtcttcgttccggggac
tatgttgtgcataaaaaagtgggtgttggaagatttgtgggtattaaattcgatgttcct
aaagattctccaaacccagttgagtatgtgttcatagaatatgcagatggaatggctaag
cttcctctcacccaggcttctcgtttgctctatcgatataatctcccgaatgaaacaaag
aggccccggacattgagtaaattgaatgacacgactgtatgggagaggagaaagactaaa
ggaaaggttgcgattcagaaaatggttgttgacttgatggagctgtatctacataggcta
aaacaaagaaggccagcctacccaaagagtcctttcatggctgaatttgaagctcaattt
ccttatgaacccacaccagatcaaaaacaggctttcattgatgtggggaaggatttgaca
gagagagaaactccgatggaccgattaatttgtggagatgttggctttggtaaaactgaa
gttgcattacgtgccatcttttgtgtagtctcagcagggaagcaagctatggttctagca
cctacaattgtattagccaaacaacattttgaggttatttcggagcgattttctatgtat
cctgaaacgaaggttggactcatgagcaggtttcagaccaaagcagagaaagaggagcac
ctgcacatgattaaaaatggtcaactggacattattgttgggactcactcgcttctcgga
aatcgtgttgtgtataataatctaggtcttctcgtggtcgatgaggaacagaggtttggc
gtcaagcagaaggagaagattgcttcattcaaaacttcagttgatgttcttacgctctca
gcaacgcctataccaagaaccctttatttagcattgactgggtttcgtgatgcaagtttg
atttcaactccacctccagaaagagtaccaataaaaactcacctttcagcatatagcaag
gaaaatgtaatatcagccatcaagtatgagctggaccgcgggggccaagttttttatgtt
ctacctcgtatcaaaggactggaagaagtgatggaatttcttgaacagtcatttccaact
gttgaaatagctattgcacatggaaagcaatactcaaagcagcttgaggaaaccatggag
aaatttgcacaaggtgaaattaaaattcttatatgcacaaatattgtggaaagtgggctt
gacattcaaaatgcaaacaccatcatagttcaggaggttcaacaatttggcttagcacag
ttgtatcagttgcgtggaagagtagggcgggcagataaggaagctcatgcacatttattt
tacccagataagtcactactgactgatcaagcactggagaggcttgctgctctagaagaa
tgtcgtgaacttggccaaggctttcaacttgcagagagagacatgggtattagaggtttt
ggcaccatctttggtgagcaacagacaggtgatgttggaaatgttggcattgatctcttc
tttgagatgctctttgagagcttgtccaaggttgaagagcattgtgttatttcagttcct
taccagtctgtacgggttgatataaatataaaccctcatcttccttctgagtacataaat
tatttggagaaccctatggaaataattaatgaagctgagaaagctgctgagaaagaaatc
tggagtttgatgcaatttacagaaaatctgcgtcgccaatatggaaaggagccttactcc
atggagcttctattgaagaagctttatgtgaggaggatggcagcagatctagggataaaa
agaatctatgcttcaggaaagatggtcggtatgaaaacaaacatgactaaactggttttt
aagctgattacagagtcaatggtgtctgatgttcaccgaaattctttggttctagaggat
gacctaattaaggcagaactacttttagagctaccaagagaacaactgctaaattggatt
tttcaatgcttggccgaacttcatgcttcgctaccagccctaataaaatactag
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