Quercus lobata (valley oak): 115976400
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Entry
115976400 CDS
T07350
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115976400
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115976400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
LXG
Cep57_MT_bd
P4Ha_N
Allexi_40kDa
CYP38_PsbQ-like
CTK3
CREPT
Motif
Other DBs
NCBI-GeneID:
115976400
NCBI-ProteinID:
XP_030953514
UniProt:
A0A7N2KYN4
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All DBs
Position
2:70629503..70638980
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AA seq
522 aa
AA seq
DB search
MGSTFNPQILMEKLAKLNNSQASIETLSHWCIFHMNKAKQVVETWARQFHCSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIENGDEFGRNAALRLVGIWEERKVFGS
RAQVLKEELVGRQLENSNRNGKNLNFKLRPSAGNKLEKIVSEYHIVYGGQSDEDVILSKC
RNAISSLEKAEKEISSDINSVGQFHGSAFVEELQGQHAVLRDCIEQLTAVESSRTSLVSH
LREALQEQEFKLDQVRNQLQAAQSQSEQAGNMCQQFLNRDKVQSLAEQSPKEAQTSLAPH
SFVPGDREQSAPVMYTRQVSYPEKSGHIEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSS
LASEGVIGNSMKESSNDYPPEKRPKLENDQSSYIPPPQNIQQPPVPPFPHPESIQHTVST
TSQQFAPNEPPPPPSSSPPPLPPLPPMPQYPVPQYMQTAGSISSVPYSYGMPQQQLPSMP
GYPPVSGISPFTTTNSYQSFQGSDGNIYNQPPSMPMAPISRQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtacattcaatccacagattttaatggaaaagctagccaagctcaacaattca
caggctagtatagagactttatcacattggtgtatattccatatgaataaagcaaaacaa
gttgttgaaacttgggctcggcagtttcattgttctccacgtgagcagagattggccttt
ctatatcttgcaaatgacatattgcagaacagtaggcgaaagggttcggagtttgttggt
gaattttggaaggttcttccagatgctcttcgtgatgtgattgaaaatggggatgagttt
ggaaggaatgctgcacttcgtctggttgggatatgggaagaaagaaaagtttttggttct
cgtgcacaagttcttaaggaagagcttgtgggtaggcaactggaaaatagtaatagaaat
ggaaagaatttgaacttcaaactgagaccatctgctggaaataaattggaaaaaatagtt
tcagagtatcatatcgtttatggtggccagtcagatgaagatgttatattgagcaaatgt
aggaatgctattagcagccttgagaaagctgagaaggaaattagcagtgatattaattca
gtaggacaattccatggatctgcatttgtggaggagctgcaggggcagcatgctgtactg
agggactgtattgaacaactaacggcagttgaatcatctagaactagtctcgtgtctcat
ttaagagaagctctccaggagcaggaattcaagctggatcaagtccgtaaccaacttcag
gccgcacagtcccagtcagagcaggcaggtaatatgtgccagcagtttctaaatagagac
aaagttcagtcactagctgagcaaagcccgaaggaagctcaaacctccctagcacctcac
agctttgtaccgggggatagggaacaatcagctccagtaatgtacactcggcaggtttcc
tatcctgaaaaatctggccacattgaggaagacccacgcaagtctgctgccgctgcagtg
gcagcaaagctaactgcatcgacatcctctgtccagatgctctcttatgtcctatcctcc
cttgcatcagagggtgtcataggcaattcaatgaaagaatcctctaacgattaccctcct
gaaaagaggcctaaacttgaaaatgaccaatcctcttacataccaccgcctcaaaatatt
caacaacctccagttcctcctttccctcatcctgaatctatccaacacactgtgtctacc
accagccaacaatttgcaccaaatgagccaccacctcccccctcgtcgtctcctccacca
ctgccaccactaccacctatgccacagtatccagtgccccagtacatgcagactgctgga
tcaataagtagtgtaccatacagctatggcatgccccaacagcagctgccttcaatgcct
ggttatcctccagtgtctgggatttctccctttacaactacaaattcttaccaaagtttt
cagggttctgatggcaatatttataaccagccaccgtccatgccaatggcaccaatttct
cgacaatag
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