KEGG   Quercus lobata (valley oak): 115976675
Entry
115976675         CDS       T07350                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115976675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115976675
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     115976675
SSDB
Motif
Pfam: HD HD_assoc_2 LMSTEN
Other DBs
NCBI-GeneID: 115976675
NCBI-ProteinID: XP_030953979
LinkDB
Position
2:76703476..76709546
AA seq 470 aa
MGAYCNDGLSLSPIYSFASSQDLRLSKHVHDNVHGNIYIDPLCLKFIDTEQFQRLRELKQ
LGMAHLVYPGAVHSRFEHSLGVYWLAGEAVQKLKNYQGLELDIDQFDIQTVKLAGLLHDV
GHGPFSHLFEREFLPQVLDGHWSHEQMSVKLVDDILDKHYIEIDPEMIRKVKEMILASSE
FVRPIGLGEKHFLYDIVANGRNGIDVDKFDYIARDCRACGLGCNFQFQRLMESMRVLGDE
ICYPAKDYLTIHKLFATRADLYRTVYTHPKVKAIELMVVDALLKANDYLNISSFIQDPSK
YWKLDDTIMKTIETASNPELKESRDLIMRIRRRNLYQFCNEYAVPKDKLENFKDVTPQDI
VCSQKNGGVILKEEDVSVSNVRIDLTRGRQNPLERINFFKDYESEDKFSIPDDRISHLLP
TSYQDMIVRVYSKKPELVAAISEAFENFQLRTYGIKAQVHATPEKKKRRL
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgggagcttattgcaacgacggactcagtctatctcccatctacagtttcgcttcctca
caagatctcaggctctccaaacacgtccacgacaatgtccacggcaacatttacatcgac
ccactttgtttgaagttcattgataccgaacagtttcaaaggcttcgtgagctgaaacag
cttggtatggcacacttggtttatccaggtgctgtgcattccaggtttgaacattctcta
ggggtgtattggcttgctggtgaagctgttcaaaagcttaaaaattatcaaggtttggag
cttgatattgatcaatttgatattcaaacagtgaaacttgcagggcttctgcatgatgtt
ggtcacgggcctttcagtcacttgtttgaacgcgagtttcttccccaggttcttgatggt
cattggtctcatgagcaaatgtcagtgaagttggtcgacgatattcttgataagcactat
attgaaattgatccagaaatgatcagaaaagtcaaggagatgatactggcaagctctgaa
tttgtacggccaataggcttaggggagaagcatttcttgtatgatattgttgcaaatggc
cgaaatggaattgatgtggacaagtttgactatattgcccgtgattgccgagcttgtggt
cttgggtgcaactttcagtttcagaggttaatggagtcaatgcgggtattgggtgatgag
atctgttatcctgctaaggactatctgaccatccacaagttatttgccactcgggcagat
ctgtatcgaacagtttatacacatccaaaagtaaaggcaatagagcttatggtggttgat
gcacttttaaaagcaaatgattatctaaatatttcatctttcattcaagatccttctaag
tactggaagctagatgacacgataatgaagactatcgagaccgcttcaaacccagaactg
aaggaatctagggacttaatcatgcgcattcgtaggaggaatttataccagttttgtaat
gagtatgctgtaccaaaggacaaactagaaaatttcaaagatgtcactcctcaagatatt
gtttgttcccagaaaaatggtggagtgatactaaaagaggaggatgtttctgttagcaat
gtcaggattgatttgactcggggaaggcaaaatcctctagaaagaatcaacttttttaag
gattatgagagtgaggataaattctcaatacctgacgatcgcattagtcacttgttgccg
acatcatatcaagatatgatagtgagggtgtactctaaaaagcctgaactggtggcagca
atctctgaggcttttgaaaattttcagttacgtacatatgggattaaagcacaagtgcat
gcaacaccagagaagaagaaacgtcgtctataa

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