Quercus lobata (valley oak): 115976756
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Entry
115976756 CDS
T07350
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115976756
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
115976756
REST complex
115976756
Heterochromatin formation proteins
Other heterochromatin formation proteins
115976756
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
115976756
NCBI-ProteinID:
XP_030954092
UniProt:
A0A7N2QZV8
LinkDB
All DBs
Position
2:complement(79002538..79013462)
Genome browser
AA seq
1445 aa
AA seq
DB search
MKRLRDDVYGSSSQFKRPFGSSRGDSFGQSQVPPGGGGGGGGGGGGGGGGGGVGGGGGGG
GGGSGLGVPSQKLTTNDALSYLKDVKEMFQDQKEKYDMFLEVMKDFKAQRTDTVGVIARV
KELFKGHNNLIFGFNTFLPKGYEITLDDDEAAPQKKAIEFQEAISFVNKIKKRFQNDERV
YKSFLDILNMYRKEHRDINEVYSEVSLLFEDHSDLLDEFTKFLPEAASVSAQHAFPRNSF
QRINERSSATPALRHVEKNRIRRDRIVTSADRDLNLDHPELDDDKGMVKMHKEQRKRVEK
DSRDRRSRDQDDREPDHDNNRDFNLQRLPDKRKSARKVEGFGVNANLASYDDKDTLKSMC
NEGFVFFEKVKEKLGSSDDYQTFLKCLDIYSSGIIGRNDLQTLVTDILGKYPDLMHGFND
FVERCENIDGFLAGVISKKSVCSDGHSSRSLKVEDKDKEQKRETDGAKEKERYREKYMFK
SIQELDLSNCERCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMR
RNQYEESLFRCEDDRFELDMLLESVSSATKRAEELLNSINENNVNLETPFHIEDNFTALN
LRCIERLYGDHGLDVLDILRKNPTVALPVILTRLKQKQEEWTRCRSDFNKVWAEIYAKNH
YKSLDHRSFYFKQQDSKNLSTKSLVAEIKDLKETKQKEDDILLAIAAGNRQPVIPHLEFD
YSNISIHEDLYKLVQYSCEEVCSTKEQVNKVMRLWTTFLEPMLGVPSQSHNTESAEDVGK
SKCRAMNCSVSIVRESDGSPSGGAIVMNSQQPKAASNEDENTSPELANSCRTMENGDTVS
KESKFLNGDHACRDDTICSIQAASGERVAHSNASFATGAEISHGKTSLEANSGWVAAPPR
PSPEISHGKTSLEATSGWAVAPPRLSPEISHGKTSLEATSGWVAAPPRPSHTASQEDLVS
KANAGSIPSSEGGDAAKPVLLANGVIAEGSNVNGCHEAFARPSKIEKEEGELSPNGDFEE
DNFVVYGGSGELSMPKAKQSRQYQAGKGEQMNCQDAGGENDADADDEDSENVSEAGEDVS
GSESGGDECSRDEHEEEEDAEHDEADGKAESEGEAEGMVDGHVGGGDGLLPLSERFLLSV
KPLAKHVPAAFLEKERKDSRVFYGNDDFYVLFRLQRILYERILSAKMNSTGAELKWKTSK
DTGSPDLYARFMSALYSLLDGSADNAKFEDECRAIIGNQSYVLFTLDKLIYKLVKQLQTV
AADEIDNKLLQLYDYEKSRKAGKLIDSVYYENARVILHEENIYRLECSPATSRLSIQLMD
SVSQKPEVFAVSMDPNFAAYLQNDYLSVFPGKKELRGEPRGILLQRNKRAYAGPDESSAL
CEAMEGVNAVNGLECKIACNSSKISYVLDTEDFFFRPRRNRRNSSSSILCRDVERVQRFH
SFLLA
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggttacgagatgacgtgtatggtagctcttcgcaattcaagcggccgtttggt
tcttcgcgtggagactcctttgggcaatcccaagttccaccaggtggaggaggaggagga
ggaggtggtggtggtggtggtggtggtggaggaggagttggaggtggaggaggaggagga
ggaggaggtagtggtcttggtgttccctcgcaaaaactaacaacaaatgatgccttatcc
tatctcaaggatgtgaaggagatgtttcaagaccaaaaagaaaaatatgacatgttcctt
gaggtcatgaaagattttaaggctcaaagaactgacaccgttggtgtcattgctagagtg
aaggaattatttaaagggcataataacttgatttttgggtttaacaccttcttgccaaag
gggtatgaaataacccttgatgatgatgaggctgctccacaaaagaaggcgattgaattt
caagaagctataagctttgtgaacaaaataaagaaacgctttcaaaatgatgaacgtgtt
tataaatcattcttagacattttgaatatgtaccggaaggagcacagggacataaatgag
gtctacagtgaggtttcccttctttttgaagatcattcagatttgcttgatgagttcaca
aaatttcttccagaagcagcatctgtttcagcacagcatgcttttccgcggaactcgttt
cagcgtatcaatgagcggagctctgccacaccagcattacggcatgtggaaaagaatcgt
atccggcgggataggattgtcacaagtgctgatcgtgatcttaatcttgatcaccctgag
ctggacgatgacaaaggaatggtgaaaatgcacaaggagcagaggaaacgtgttgaaaag
gacagcagggataggagaagccgtgatcaggatgatagagaacctgatcacgacaacaat
agggacttcaacttgcagcgtttacctgacaaaagaaaatctgcaaggaaagttgaaggt
tttggagtgaatgcaaatttggcttcatacgatgacaaagataccttaaagagcatgtgc
aacgaaggattcgttttctttgaaaaagttaaggagaagttgggcagctctgatgactac
cagacattcttgaagtgccttgatatttacagcagtggaattattggacgaaatgattta
caaactctggtgactgatatacttggaaaatatccggatcttatgcatgggtttaatgat
ttcgttgagcgctgtgagaatatagatgggtttcttgctggcgttattagtaaaaaatca
gtgtgtagtgatggacattcttctagatcgctgaaggtagaggacaaagataaagagcag
aagcgtgaaactgatggagctaaagaaaaggaaagatacagggaaaagtatatgtttaaa
tccattcaagagcttgacctctctaattgtgaacgttgtactcccagctataggcttctg
ccagacgattatccaataccttcagcaagccagaggtcagagcttggtgctcaagtattg
aatgatcactgggtatcagtgacttctggaagtgaggactattcttttaaacatatgcgt
agaaatcagtatgaagaaagtctattcagatgtgaagatgatagatttgagctggatatg
ctgttagagtctgtcagctcagctaccaagcgtgcagaggaattgttgaacagcatcaat
gaaaataatgtcaatctggagactcctttccatattgaagacaacttcactgctttaaat
ttaaggtgtattgaacgtttatatggtgatcatggacttgatgtgttggatattttacga
aaaaatccaactgttgcactacctgtcatattaactcgcctaaagcagaaacaagaggag
tggacaaggtgccgctctgatttcaacaaggtttgggctgaaatctatgctaaaaaccac
tacaagtcacttgatcaccgcagcttctatttcaagcaacaggattcaaagaacttgagc
acaaaatctttggtggctgagatcaaggatttgaaagagacaaagcaaaaagaggatgat
attcttctggctattgctgctgggaatcggcaacctgtaattccacatctggaatttgat
tactccaatatcagcattcatgaagacttgtataaacttgtccaatattcatgtgaagag
gtttgctcaaccaaagaacaggtgaataaagttatgagactttggacgaccttcttagag
ccaatgttaggtgttccttctcagtctcataatacagaaagtgctgaagatgttggaaaa
tctaagtgtcgtgctatgaattgttccgtatcaatcgtaagagaaagtgatggaagtcct
agtggtggtgctattgtaatgaattctcagcaaccaaaagctgctagtaatgaggatgag
aatacctcacccgaactagcaaattcttgtaggactatggaaaatggggacactgtatct
aaagaaagtaaatttcttaacggagatcatgcatgtagagatgatacaatttgtagcata
caggctgcctctggtgaacgagttgcccattccaatgcatcatttgctactggggcagag
atcagtcatggcaaaaccagcttggaagcgaattcaggctgggttgcagctccacccaga
cctagtccagagatcagccatggcaaaactagcttggaagcgacatcaggctgggctgta
gctccacccagacttagtccagagatcagtcatggcaaaaccagcttggaagcgacttca
ggctgggttgcagctccacccagacctagtcacactgctagtcaagaagaccttgtatct
aaggctaatgctggttctataccttcatctgagggaggtgatgctgccaaaccagtttta
ttggcaaatggcgtgattgcagaaggtagtaatgttaatggatgtcacgaagcatttgca
agaccctcgaaaattgaaaaagaagagggtgagttatcacctaatggtgattttgaggag
gataactttgttgtctatggaggctctggtgagctgtctatgcctaaggcaaagcaaagc
aggcaatatcaagccgggaaaggagagcagatgaattgtcaggatgctggaggagaaaat
gatgcggatgctgatgatgaagatagtgaaaatgtttctgaggctggtgaagatgtctca
ggcagtgagtctggtggtgatgagtgctccagagatgagcatgaagaagaggaagatgca
gagcatgatgaagctgatggtaaggctgagagtgaaggtgaggctgagggcatggttgat
ggacatgttggtggaggggatggcttgttgccattgtcagaacggttccttttgtctgtg
aagcctcttgcaaagcatgtgccggcagcatttcttgaaaaggaaagaaaagattctcga
gttttttatggaaatgatgatttttatgttctttttaggcttcaacgaattttatatgaa
agaattttatcagcaaaaatgaattcaacgggtgctgaattgaaatggaaaacttcgaag
gatactggttctccagatctctatgctagatttatgagtgcactgtacagtttgcttgac
ggatctgcagataatgcaaagtttgaggatgaatgtcgagctatcattggaaaccagtca
tatgttttattcacattggacaagttaatctataaattagtcaaacagcttcaaactgtt
gcagctgatgagatagacaataagcttcttcaattatatgactatgaaaaatcccggaaa
gctgggaagttgattgattctgtatattatgaaaatgcacgtgtcatccttcatgaggaa
aacatatatcgattggaatgttcccctgccacctcccgattgtccattcagctgatggac
agtgtgagtcaaaagcctgaagtgtttgcagtttccatggatcctaattttgcagcttat
ctgcagaatgattatttgtccgtctttcctgggaaaaaggagctacgtggggagccacgt
ggcattctactgcaaaggaacaagcgagcatatgcaggcccagatgaatcttctgcttta
tgtgaagccatggaaggtgtcaatgcagtcaatggtttggaatgtaagatagcttgcaat
tcatcgaagatctcctatgttcttgacacagaggatttcttcttccgacctagaaggaat
agaagaaattcatctagcagcattttgtgtcgtgatgtggaaagagtacaacggttccac
agtttcttattggcttaa
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integrated database retrieval system
