Quercus lobata (valley oak): 115976886
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Entry
115976886 CDS
T07350
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115976886
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115976886
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
115976886
NCBI-ProteinID:
XP_030954266
UniProt:
A0A7N2L129
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Position
2:82570861..82577959
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AA seq
549 aa
AA seq
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MAGQRNNYGKRTHSQSDHSDNGGNKRRNPGDDRDQFVIDSEDTVYRYLCPVRKIGSVIGR
GGEIVKQLRADTKSKIRIGETVPGCEERVVTLYSSSDETNAFEDTGNYVSPAQDALFKVH
DRVIAEDLHGDEESDGGHQVTARLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDH
LPPCALSSDELVQVSGEAPVVKKALYQIASRLHDNPSRSQHLLTSSVPNVYQSGGSLMGP
AGGAPIVGIAPLMGPYGGYKGDTGDWSRSLYSAPRDDASSKEFSLRVVCPTANIGGVIGK
GGAIINQIRQESGAVIKVDSSTSEGDDCLITISAKEFFEDTFSPTIEAAVRLQPRCSEKV
ERDSGIISFTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASDDDEM
VQISGDLDVAKDALIQVVTRLRANLFDREGAVSAFLPVLPYLPVSADGSDSLNYESRDSK
RHGRVHSYSGGYGGSSDLAAADNYGSYGGSQIGGSGNAYGAYGGYSSGRTGSSGLSGQAP
VSRRRNYGY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctggccagaggaataattatgggaagcggacccattctcaatccgaccattctgac
aatggcggtaataaaaggagaaatcccggtgatgatagagaccaatttgtcattgattcg
gaggacactgtatatcggtatttgtgccctgtaagaaagattggaagtgttattggtagg
ggtggggaaattgtcaagcagttgagggcagacactaaatcaaagattaggattggggag
acagtgccaggatgcgaggagcgtgttgttactctctacagctccagtgatgagactaat
gcttttgaagatactggcaattatgtttctccagcacaagatgctcttttcaaggtgcat
gacagagttatcgctgaagatttgcatggtgatgaggaatctgatggaggtcaccaagtt
actgctcgccttcttgttccatctgatcagattggttgcgtaattggaaagggtggacag
atagttcagaacattcgtagtgagactggagcccaaattcgcattcttaaggatgatcat
ttgccaccttgcgccttaagctctgatgagctggtacaggtatctggggaagccccagtt
gtgaaaaaggctctatatcaaattgcatctcgccttcatgataatccttcacgttctcag
catttgcttacttcttctgtacccaatgtgtaccaatctggtggctcacttatgggtccg
gctggtggtgccccaattgtgggcatagctccactgatgggtccttatggaggatacaag
ggtgatactggtgactggtctcgctccttatactcagctcctagggatgatgcatcttca
aaagaattctctcttcgtgtagtttgtcctactgccaatattggaggcgtgattggcaag
ggtggtgccataatcaatcagatcagacaggaatctggggctgtcattaaagttgacagt
tcaacttctgaaggagatgattgcttaataactatttcagcaaaggagttttttgaagac
acattttctccaactatagaagcagctgtgcgtttgcaacccaggtgtagtgagaaagtt
gaaagagattcaggaattatctcatttacaacccgcctgcttgtgccgacttcacgaatt
ggctgtcttattggtaagggaggagctattgtaactgaaatgaggagactcaccaaagct
aatattcgaatactctcaaaggaaaaccttcccaaagtcgcatccgatgatgatgagatg
gtgcagatttccggagaccttgatgttgccaaggatgctcttatacaagtagttacacgg
ttaagagcaaatctttttgatagggagggtgcagtgtctgcatttctgccagttcttcca
tatttgcctgtgtcagctgatggttctgatagtttaaactatgaaagtagagatagcaaa
agacatggtcgtgtgcattcttattccggtggttacggtggctcaagtgatttggcagct
gctgacaattatggaagttatggtggatcacagattggaggcagtggcaatgcctatgga
gcttatggtggttattcttcaggacgtactggtagctctgggttgtcaggccaggcccct
gtttctcgtcggagaaactatggatactag
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