Quercus lobata (valley oak): 115977000
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Entry
115977000 CDS
T07350
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115977000
03036 Chromosome and associated proteins [BR:
qlo03036
]
115977000
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115977000
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115977000
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115977000
microRNA pathway
RISC loading complex
115977000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
115977000
NCBI-ProteinID:
XP_030954477
UniProt:
A0A7N2L131
LinkDB
All DBs
Position
2:86631493..86646039
Genome browser
AA seq
926 aa
AA seq
DB search
MLMKDPKENPVISREPLLNSMKEKNEDFMKDTKKIIARRTGGRRGKGPKVEKFQVEKLDT
DVGSPASCKSLMFHRRPGYGQLGTKCLVKANHFIANIPDSDICHYSVKIDPEVTSHKLNK
VIMTQLVKLHRESDLGMRLPVYDGARNLYTAGFLPFTTKNFIIILSDDEEGACNRREREF
KVTISFITLASMQQLRELLAGKPVDTPHKALTIIDIVLRQLAAQRYVSVGRFLYSPDIKK
PQQLGGGLESWRGFYQSIRPIQMGLSLNIDMSSTAFIEPLPVIDFVAQILDKDVYSRPLS
DADRVKVKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPVDEQKNMKSVVEYFQE
VYGYTIQYSHLPCLQVGNQKKVNYLPLEACKIVGGQRYTKGLNEKQITSLLKVSCQRPHE
QEMDILQTVHQNDYEKDPYAKEFGISIDNKLASVEARVLPAPWLKYHDSGKEKEYLPQVG
QWNMMNKKVINGSTVRHWACINFSKTVQQSTACSFCQQLVQMCQISGMEFNRDPVIPIYS
ARSDQVKKALKYVYYAAASKLEGKELELLIAILPDNNGSLYGDLKRICETELGLISQCCL
TKYVFNSSRQYLANVSLKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPETGD
DSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKTWKDPQRGMVTGGMIRELLL
SFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFIVVQKRH
HTRLLANNHNDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLW
DENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVHENAKTRC
TRATNGSCVRPLPALKEKVKNVMFYC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgctaatgaaagaccctaaggagaaccctgtgatatccagggaacctctactgaactca
atgaaagagaagaatgaagacttcatgaaagatacaaagaagattatagcaaggagaacg
ggagggagaagaggtaagggaccaaaagtggagaaattccaagtagagaagctggatact
gatgtggggtcccctgcttcatgcaaaagccttatgttccatcgtagacctggctatggc
caactggggacaaagtgtttagttaaagccaatcacttcattgcaaacataccagactcg
gatatatgtcactatagtgttaagattgaccctgaggttacttctcataaattgaacaaa
gttatcatgacccagttggtgaaacttcatagagagtcagacctggggatgaggctccct
gtctatgatggagcaagaaacttatacacagctggatttctgccttttactacaaaaaac
ttcatcataatattgagtgatgatgaggagggggcatgcaatagaagggaacgagaattt
aaagtgacgataagttttataactttagctagtatgcaacaattacgtgagcttcttgct
gggaagccagttgatacccctcacaaagcacttaccattattgatattgtcttaaggcaa
ctagcagcccaaaggtatgtatcagttggaaggtttctctattctcctgatattaagaaa
ccacagcaattgggtggtggcttagaatcatggcgaggattctaccagagtattaggcct
attcagatgggactgtccctgaatattgacatgtcatcgactgcgttcattgaaccactc
cctgtcattgattttgttgctcagattttagataaagatgtgtattcaaggccattatca
gatgctgatcgtgttaaggttaagaaagcccttagaggtgtcaaagtagaagttacgcat
agaggaaatgttcgaaggaaataccgcatttcagggttgacatcacagcctacaagggag
ctaattttcccagtagatgagcaaaagaacatgaaatcagttgttgagtactttcaagag
gtgtatggatataccattcaatattctcatctaccttgtcttcaagtgggaaatcaaaag
aaggtgaactatttgccattggaggcttgcaagatagttggcggacagagatacactaaa
gggctgaatgagaagcagataacttctctgctaaaagtttcatgccaaagaccccatgaa
caagaaatggacattttacagacagttcatcaaaatgactatgagaaagatccctatgca
aaggaattcggcatcagtatagacaacaagcttgcatctgttgaggctcgggttcttcca
gctccatggcttaagtatcatgattctggaaaggaaaaagaatacttgcctcaagttggt
cagtggaatatgatgaacaagaaagtaataaatggaagcaccgtcagacattgggcttgc
atcaacttctcaaaaaccgtccaacagagcactgcttgtagtttctgtcaacagttggtt
cagatgtgccaaatttctggcatggaatttaaccgggaccctgtaattccaatatattca
gccagatcagatcaggtaaagaaggccttaaaatatgtgtattatgctgctgcaagcaag
ctagaaggaaaagagttggagttgcttattgccattcttccagacaacaatggctcttta
tatggtgatctaaaacgaatttgcgaaacagagctggggttgatttctcagtgctgcctt
acaaaatatgtcttcaactctagcagacagtatctggcaaatgtgtcacttaaaatcaat
gtcaagatgggaggaagaaataccgtgcttttagatgcattaagttggaggattcctttg
gtcagtgacattccaacgataatttttggagctgatgttactcatccagaaaccggagat
gattcttgtccatctatagctgctgttgtagcctcccaagattggccagaagttacaaag
tatgccggtttggtatgtgcacagcctcatcgagaagaacttatccaagatttgttcaaa
acctggaaagatcctcaacggggtatggttactggaggcatgatcagagagcttttactt
tcatttaagaaggctactggacaaaaaccattgagaataatattttacagggatggtgtt
agtgaaggacaattctaccaggtcttactatatgaacttgatgccattcgtaaggcttgt
gcatcattggaacctagttaccaacccccagtaacatttattgtggttcaaaagaggcac
cacaccaggctcctcgcaaacaatcacaatgacagaagtagcactgacaagagtggaaat
atcttacctggtactgtggtggattcaaagatttgtcatcctactgagttcgacttttat
ttatgtagtcatgcaggaatccagggaaccagtcgaccagctcattatcatgttctctgg
gatgagaacaattttactgcagatgaaattcaatcactgaccaacaacctgtgttatacg
tatgctcgatgcactcgatctgtttctgtagtgcctcctgcatattatgctcacctggca
gcttacagagctcgattctacatggaacctgatgtgcatgagaatgccaaaacgcgttgc
acacgggccactaatggttcatgtgtccgtcctcttccagctttgaaagagaaggtgaag
aatgtgatgttttactgctag
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