KEGG   Quercus lobata (valley oak): 115977285
Entry
115977285         CDS       T07350                                 
Name
(RefSeq) uncharacterized protein LOC115977285
  KO
K03873  elongin-B
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115977285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:qlo04121]
    115977285
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115977285
Ubiquitin system [BR:qlo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     115977285
   Cul5 complex
     115977285
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115977285
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N Ubiquitin_2 UBL_UBAC1 Rad60-SLD_2
Other DBs
NCBI-GeneID: 115977285
NCBI-ProteinID: XP_030954915
LinkDB
Position
2:complement(93959039..93964839)
AA seq 103 aa
MAMYIRVKRSKTTYFIRCDPTETVLDIKEKLQVLIDQPVNNQRLILVGTGEVLEDSKTLA
DHKVENDSVVALTLRKDDNEFEEVDIVRPNDFCQSRDADTGNW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctatgtatatccgtgttaagcgtagtaagacaacttacttcatacggtgtgatcct
actgaaacagttctagacataaaggagaaattgcaagtcctcatcgatcaaccagttaac
aatcagcgtttgatcctagttggtactggggaagttttagaggattcaaagacattggca
gatcataaggttgaaaatgattcagttgtggcactgaccttgagaaaagatgataatgag
ttcgaggaggtagacattgtgcggccaaatgatttttgccaatcacgggatgcagacact
ggcaattggtaa

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