Quercus lobata (valley oak): 115977289
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Entry
115977289 CDS
T07350
Name
(RefSeq) DNA-directed RNA polymerase 3, chloroplastic isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115977289
Enzymes [BR:
qlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115977289
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
115977289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
115977289
NCBI-ProteinID:
XP_030954922
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All DBs
Position
2:complement(94081324..94097579)
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AA seq
982 aa
AA seq
DB search
MTFAASFSPSPQPQIYTNTLKRPLKLNPKSHKNLFFFFSSSSSTFFKPSLPSTTTFPLNL
KTPSNPIQFHPLSDSIHDNLVEDLENSVNSHIPINEICQITPLESSPRIFIQDPPWIASI
FLRGLYKRADQEVKLEYKEMEKRKYNLLRRRQIKAETEAWERMVEEYRELEREMCEKKLA
PTLPYVKALFLGWFEPLRDAIEKEQKVQRTKKHKAAFAPHIDLLPADKMAVIVMHKMMGL
FMMGNQEGYVQVVQAAIQVGVAIEQEVRIHGFLEKTKNSQSKKIVADTEDGLHKEKQILR
KRVNSLIRKRKLKEAQKLLKKEEFKPWGRDTQAKLGSRLIELLTETAYVQPPLNQSADGP
PDIRPAFRHKFKPVIKNPGQKIVKNYGIIECDPLILMGLDKTAKHALIPYVPMLVPPKKW
KGYDKGGHLFLPSYVMRTHGSRKQQDAVKNVPVKQMQKVFEALDMLGNTKWRVNRKVFSV
VESIWARGGNIAGLVDCEDVPIPEKPSSEDLTEIQEWKWSWRKAKKINLERHSQRCDTEL
KLSVARTMIDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHW
LKIHLANLYSGGVEKLSHDGRLAFVDNHLDDIFDSADNPVNGNQWWLTAEDPFQFLAACI
NLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLTAGDKPADVYSEI
AVRVHDIMKRDSNKDPATNPHALLAKVLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRR
LEEKGLITDDRLLFTAACYAAKVTLAALGEIFEAARGIMGWLGDCAKVIASENQPVRWTT
PLGLPVVQPYCRSERHLIRTSLQILALQREGNMVDVRKQRTAFPPNFVHSLDGTHMMMTA
VACRDAGLRFAGVHDSFWTHASDVDKMNQILREKFVELYSKPILENLLESFQTSYPELMF
PPLPERGDFDLQEVLESPYFFN
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgcagcctcattctctccaagtccacaacctcaaatatacaccaacactttg
aaaagacccctaaaactcaacccaaagtcccacaaaaacctcttcttcttcttcagctca
agctccagtaccttcttcaaaccttcactcccttccaccactactttcccactcaacctc
aaaaccccttcaaacccaattcagttccaccctttatcagattcaatccatgacaatcta
gtcgaagaccttgagaattctgtgaattctcacatacccattaacgaaatttgccaaatt
acgccgctagaatcgagcccgagaatcttcatccaagacccaccttggattgcctcaata
ttcttgaggggtctgtacaaaagggccgaccaagaagtgaaattggagtacaaagaaatg
gagaagaggaagtataacttgttgaggaggagacagattaaggcggagaccgaggcgtgg
gagagaatggtggaggagtatagggagctagaaagagaaatgtgtgagaagaagttggct
ccaactttgccatatgtaaaggcattgtttttgggatggtttgagcctttgagggatgca
atagagaaggaacagaaggtgcagcggacgaagaagcataaggcggcgtttgcacctcac
attgatttgttgcccgcggataagatggcggttattgttatgcataagatgatggggttg
tttatgatgggaaatcaggaggggtatgttcaggttgttcaggctgcaattcaagttggt
gtggctatagagcaggaggttagaattcatggtttcttggagaaaactaaaaattcccag
agcaagaagattgtagctgatactgaagatggtctgcacaaggagaagcagatactcaga
aaacgtgtaaatagtttaattagaaagagaaaactaaaggaggcacagaagctattgaag
aaagaagaatttaagccttggggtcgagatacccaggctaagctgggaagtcgtttgata
gaattattaactgaaacagcttatgtacaacctccacttaaccagtcagcggatggtcca
cctgacattcgacctgcattcaggcataaatttaaacctgtaataaagaatccaggacag
aaaattgtgaagaattatggaattatagaatgtgaccctctaatccttatggggcttgat
aaaactgctaagcatgcgttgattccttatgtgcccatgttggtacctcccaaaaaatgg
aaagggtatgacaagggtgggcatttattcctaccttcttatgtcatgcgtactcacgga
tctaggaagcaacaggatgcagtaaagaatgttcctgttaaacagatgcaaaaggttttt
gaggctctggatatgcttggtaacaccaaatggagagtaaatagaaaagtatttagtgta
gtggagagcatttgggccagaggaggcaatattgctggcttggttgattgtgaagatgtg
cctatacctgagaagccatcctcagaggatttaacagaaattcaagaatggaaatggagt
tggaggaaggcaaagaagattaatctagagaggcattctcaacgatgtgacactgaactt
aagctttctgtggctcgaacaatgattgatgaggaaggcttttattatcctcacaatctt
gattttcgtggccgagcatacccaatgcatccacatttgaatcatttgagttctgatctc
tgtcgagggatacttgagtttgctgaaggacgaccgttagggaagtctggcttacactgg
ctgaagatacatttagcgaacctgtattcaggtggtgttgagaagctttcacacgatgga
cgtctagcctttgttgataatcatctcgatgatatatttgattcagcagacaaccctgtt
aatggaaaccagtggtggttaacagctgaagatccttttcaattcttagctgcttgtatt
aatctttcagaagccttgagaagctcatcaccacataccgtcatctcccacctgccgatt
catcaggatggttcatgcaatggtttacagcactatgcagcactgggaagagatagtatg
gaagcagctgcagtcaacttaactgctggtgacaaacctgctgatgtttactctgaaatt
gctgtgagggtgcatgatattatgaaaagggacagcaacaaggacccagctacaaatcca
catgctttattagctaaggtcttaattgatcaggtcgatcggaaattggtgaaacaaaca
gtgatgacttcagtatatggggttacttatgttggggcacgggagcagataaaaagaaga
ctagaggagaaaggtctcattactgatgacagactactgtttactgcagcttgctatgcg
gctaaagtaacattggctgcccttggagagatttttgaagctgcacgtggcattatgggt
tggcttggtgattgtgccaaggtaattgcttctgaaaatcaacctgtgcgttggaccact
cctcttggtctcccagttgtacaaccctactgcagaagtgaaaggcatcttataaggacg
tctcttcagattttggctttgcagcgggagggtaacatggtagatgttagaaaacagaga
actgcatttcctccaaattttgtacactcgcttgacggtacacatatgatgatgactgct
gttgcctgcagggatgctggcttacgttttgcaggggtgcacgactccttctggacacat
gcgagtgatgtcgacaaaatgaatcagatacttcgagaaaagtttgtggagctttatagc
aagccaatacttgaaaatttgcttgagagcttccaaacatcatatccagaactgatgttt
cctcccctcccagagagaggtgactttgacttgcaagaggttcttgaatctccatacttt
ttcaactga
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