Quercus lobata (valley oak): 115977298
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Entry
115977298 CDS
T07350
Name
(RefSeq) nuclear pore complex protein NUP43
KO
K14305
nuclear pore complex protein Nup43
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115977298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115977298
03036 Chromosome and associated proteins [BR:
qlo03036
]
115977298
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115977298
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115977298
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
115977298
NCBI-ProteinID:
XP_030954938
UniProt:
A0A7N2R089
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Position
2:complement(94219244..94224858)
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AA seq
365 aa
AA seq
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MAITGTGTGTGTALRDPPQIHRFPQTKYIDAVRWLPQLSAFDRFAVLSLFDSDSNTPSLE
IYSLNPQSQTLTLTPQPTFSPPSRISSLKTSQTPNHKPLIAASTFSGSLHLLFANAVDAS
LESECSVPAKELHVGAVSCVDVKDGGAECVTVGEDGRVNLVGVTGSGLSCRRVFDSDGLV
SYTAAKWASPVEFATGGYGFSLQWWDQRKPGGAVSQFKGNWTQGTTSGIVHSIDIHPSRK
HTCLAGGSLGTVFAWDLRWQQQPIILSGIGAGDAAIPSACESEVWEVQYDCYTKSTNMGN
ISSSRILPAIICSEDGILAVVEQDVEPMELLAETCAINSFDIDRENPSDIICSLEWESIA
ILTRP
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcacaggcacaggcacaggcacaggcacagctctccgagacccacctcaaatc
cacagattcccacaaaccaaatacatcgacgccgtccgctggctccctcagctctccgcc
ttcgaccgcttcgccgtcctctctctcttcgactccgactccaacaccccctctctcgaa
atctactctctcaatccccaatcccaaaccctaaccctaacccctcaacccacattttct
ccgccttcccgaatctcctccctcaagacctcccaaaccccaaaccacaaacccctcatc
gccgcctccaccttctccggctccctccacctcctcttcgccaacgccgtcgacgcctcg
ctcgagtccgagtgctcggtccccgcgaaggagctgcacgttggggctgtgtcttgtgtc
gatgtgaaggacggtggggctgagtgtgtgaccgttggggaggacgggagggtcaatttg
gttggggttacgggttccgggttgagttgtcgccgggttttcgatagtgatgggttggtt
tcgtataccgcggcgaaatgggcgtcgccggtggagtttgccaccgggggttatgggttt
agtcttcagtggtgggatcagaggaaacccggcggggcggtttctcagttcaagggaaat
tggactcaaggaacaacttctgggattgtacactccattgatattcatccgtcaagaaaa
catacttgtctggcaggaggctctttaggcactgtatttgcctgggatcttaggtggcaa
caacagccaattattctttctgggattggggcaggtgatgctgcaatcccttcagcatgt
gaaagtgaggtttgggaggttcagtatgactgctataccaagtctacaaacatgggcaac
atctcatcctcacgaattttacctgctattatatgctcagaggatggtatccttgctgtt
gttgaacaagatgtagaacccatggagctattggcagaaacttgtgcaatcaacagcttt
gacattgaccgggaaaacccctcggacataatatgtagtttggagtgggagtctatagcc
atcttgacaaggccataa
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