Quercus lobata (valley oak): 115977311
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Entry
115977311 CDS
T07350
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
115977311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115977311
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115977311
Membrane trafficking [BR:
qlo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
115977311
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115977311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_Vps41
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40
BCAS3_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115977311
NCBI-ProteinID:
XP_030954956
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All DBs
Position
2:94576856..94588349
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AA seq
380 aa
AA seq
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MANQSSSSCSSSSSSSSSSYPILCASFNQDASCFVIGTRDGFKVFDTNTGRLCYERAIGA
FIIVEMLFSSSLLAIVGAGEQPSLSPRRLCLFNTRTGTALRELNFLTSILAVRMNKKRLV
VVLQDKTYVYDLNTVKILDSIDTVPNLKGLCAFSPSLDSCFLALPASTVKGSVLLYNVME
LQSHCEIDAHRAPLAAIVLSSNGMYIATASEQGTIIRVHLVSDASKSYSFRRGTYPSNIF
SLSFGPSMQLPDILVATSSSGSLHVFSMGFAINQRKSSSILGSIIPDSVADALDPTHHQV
LQCAVTAGVKSNSVIRKVDKVVADSSTSEIVSCKATISIITYNGYFQEYSLSIHQQNDPV
WTLEHEFNLLTVISDNAISL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcagtcctcctcctcttgctcttcctcttcctcctcctcctcctcgtcctac
ccaattctctgcgcttccttcaaccaggacgccagttgctttgtgatagggacaagggac
ggtttcaaagtctttgacacgaatacaggaagactctgttatgaacgagctattggagcc
ttcattattgttgaaatgctgtttagctccagtcttcttgccattgttggagctggtgaa
cagccatctttatctccccgccgtctttgtttgttcaatacaagaactggaactgctctc
cgagaattgaattttttgacttcaatacttgctgttcgcatgaataagaaaaggcttgtt
gttgttttgcaagataagacatatgtctatgatttaaatactgttaaaatcttggactct
attgatacagtgccaaatctaaaagggctttgtgcattctcacccagtttggatagttgc
ttcttggctcttcctgctagcactgtcaaagggtctgtgttgttgtacaatgtcatggag
ctccagtcacattgtgagatagatgcacatcgtgcacctctggctgcaattgtcctttct
tccaatgggatgtatatagcaactgcttctgaacagggaaccataatcagagtccatttg
gtttcagatgcaagtaagtcatatagttttcggagggggacatacccatcaaatatattt
tccttatcatttgggccatctatgcaacttcccgatattcttgtggccacaagttcttcc
ggttctcttcatgttttctctatgggatttgctataaatcaaaggaaatcaagtagtatt
cttggatcaataatacctgactctgttgctgatgcactggatccaactcaccatcaagta
cttcaatgtgctgttacagcaggagtcaaaagcaattcagtgattcgcaaagttgacaag
gttgttgctgattcgtccacatctgaaattgtatcttgcaaggctaccatatccataatt
acctacaatggttacttccaggagtacagcttaagtatccaccagcagaatgaccctgtg
tggactttggagcatgaatttaatcttttaacagtgatctcagataatgccattagttta
tga
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