KEGG   Quercus lobata (valley oak): 115977311
Entry
115977311         CDS       T07350                                 
Name
(RefSeq) autophagy-related protein 18b
  KO
K17908  autophagy-related protein 18
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    115977311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:qlo04131]
    115977311
   03029 Mitochondrial biogenesis [BR:qlo03029]
    115977311
Membrane trafficking [BR:qlo04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    115977311
Mitochondrial biogenesis [BR:qlo03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    115977311
SSDB
Motif
Pfam: PROPPIN Beta-prop_Vps41 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WD40 BCAS3_WD40 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 115977311
NCBI-ProteinID: XP_030954956
LinkDB
Position
2:94576856..94588349
AA seq 380 aa
MANQSSSSCSSSSSSSSSSYPILCASFNQDASCFVIGTRDGFKVFDTNTGRLCYERAIGA
FIIVEMLFSSSLLAIVGAGEQPSLSPRRLCLFNTRTGTALRELNFLTSILAVRMNKKRLV
VVLQDKTYVYDLNTVKILDSIDTVPNLKGLCAFSPSLDSCFLALPASTVKGSVLLYNVME
LQSHCEIDAHRAPLAAIVLSSNGMYIATASEQGTIIRVHLVSDASKSYSFRRGTYPSNIF
SLSFGPSMQLPDILVATSSSGSLHVFSMGFAINQRKSSSILGSIIPDSVADALDPTHHQV
LQCAVTAGVKSNSVIRKVDKVVADSSTSEIVSCKATISIITYNGYFQEYSLSIHQQNDPV
WTLEHEFNLLTVISDNAISL
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggccaatcagtcctcctcctcttgctcttcctcttcctcctcctcctcctcgtcctac
ccaattctctgcgcttccttcaaccaggacgccagttgctttgtgatagggacaagggac
ggtttcaaagtctttgacacgaatacaggaagactctgttatgaacgagctattggagcc
ttcattattgttgaaatgctgtttagctccagtcttcttgccattgttggagctggtgaa
cagccatctttatctccccgccgtctttgtttgttcaatacaagaactggaactgctctc
cgagaattgaattttttgacttcaatacttgctgttcgcatgaataagaaaaggcttgtt
gttgttttgcaagataagacatatgtctatgatttaaatactgttaaaatcttggactct
attgatacagtgccaaatctaaaagggctttgtgcattctcacccagtttggatagttgc
ttcttggctcttcctgctagcactgtcaaagggtctgtgttgttgtacaatgtcatggag
ctccagtcacattgtgagatagatgcacatcgtgcacctctggctgcaattgtcctttct
tccaatgggatgtatatagcaactgcttctgaacagggaaccataatcagagtccatttg
gtttcagatgcaagtaagtcatatagttttcggagggggacatacccatcaaatatattt
tccttatcatttgggccatctatgcaacttcccgatattcttgtggccacaagttcttcc
ggttctcttcatgttttctctatgggatttgctataaatcaaaggaaatcaagtagtatt
cttggatcaataatacctgactctgttgctgatgcactggatccaactcaccatcaagta
cttcaatgtgctgttacagcaggagtcaaaagcaattcagtgattcgcaaagttgacaag
gttgttgctgattcgtccacatctgaaattgtatcttgcaaggctaccatatccataatt
acctacaatggttacttccaggagtacagcttaagtatccaccagcagaatgaccctgtg
tggactttggagcatgaatttaatcttttaacagtgatctcagataatgccattagttta
tga

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