Quercus lobata (valley oak): 115977356
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Entry
115977356 CDS
T07350
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03060
Protein export
qlo04141
Protein processing in endoplasmic reticulum
qlo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
115977356
04141 Protein processing in endoplasmic reticulum
115977356
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115977356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115977356
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
qlo02044
]
115977356
Membrane trafficking [BR:
qlo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
115977356
Secretion system [BR:
qlo02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
115977356
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
115977356
NCBI-ProteinID:
XP_030955038
UniProt:
A0A7N2L2L4
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Position
2:complement(96046194..96051778)
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AA seq
540 aa
AA seq
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MLITVRELSSSSLLSFQLNPKATPTPRLKKSICRASFSVQRKPNTTKSWNFGLHSNSCEG
SVFDPLGINSDVPSGLNAAWESFLCLFSQTYESASSAKKEKPSSARGVAAAIEDSNIDFG
DFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNSEAFLGNLDQNSLLSTLDTFSGGGIGR
LGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAI
GQVLYLRPYVNDFSTQWVLTSVTLLTLGSAFTTYIGERITDLKLGNGTSLLIFTSIISYL
PASFGRTVAQAFQDGNYIGLIAIIVSFFLLVLSIVYVQEAERKIPLNYASRYTSKSGGLQ
KSAYLPFKVNSSGVMPIIFSTSSLALPATLARFTGLNALKNAAVALNPGGSFYLPTNILL
IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSGFLAIL
AAGPALIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDKYGP
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacggtcagagaactttcttcttcttctctccttagcttccaactcaatccc
aaagccactccaactccaaggctcaagaaatcaatctgccgtgccagcttctctgttcag
agaaaacccaacaccaccaaatcatggaactttggccttcactccaacagctgtgagggc
tccgtatttgatcccttgggtattaattcagatgtaccttctggtttaaatgctgcctgg
gaaagttttctgtgcttgttttcacaaacatatgaaagtgcttctagtgcaaaaaaggag
aaaccttcctctgctcgaggagtagcagctgcaatagaggacagtaacattgattttggg
gacttcttcaaaggtccattaccaggaaagtttctcaagctcttaggttatctagcctta
tcacggcttggaatatacatacctcttggtggggtaaatagtgaggcttttcttggaaat
ttggatcagaacagtttattgagcactctggatacattttctggaggaggcattggtaga
cttggaatatgctctcttggtattgttcccttcatcaatgcacagattgtgttccagctt
cttacgcaaatttatcccaagttgcaagatcttcagaaaagagaaggagaagcaggaaga
aagaaaattcttcagtatactcgatatgcttcagttgggtttgccattgtacaggcaatt
ggccaagtactctaccttcggccctatgtcaatgacttcagtacacaatgggttcttact
tctgttaccttattgactcttggctcagcatttacaacatacataggggagcgaattacg
gacctcaaacttggaaatggcacatcccttttgatattcacaagcattatctcctacttg
cctgcatcttttggtaggactgttgcacaagcatttcaggatggtaactacattggactc
atcgcaatcattgtctccttcttcctattggtcctcagtattgtatatgttcaggaagca
gagaggaaaattccacttaactatgcctcgagatacaccagtaaaagtggagggcttcaa
aaatctgcttacctaccctttaaggtgaatagttctggagtgatgccaattatattttct
acctcatcattagctcttcctgctactctagcacgctttactggtttaaatgcactgaag
aatgccgcagtggccttaaatccagggggttctttctatctccccacgaacatcctttta
atagccttcttcaactactattatactttcctacaattggaccctgatgatgtgagtgaa
cagttaaagcgccaaggtgcatcaattccacttgtgcgaccgggtaaaagtacagctgca
tttattaaaacggttcttagtcggatatcagttcttggttcgggctttttggcaatactg
gctgctggtcctgccttgatagaacaaaccacacacctgactgcatttcggggatttgct
ggtacatctgttctcattcttgttggctgtgcaacagacactgcaagaaaagttcaagca
gaaataatttcccaaaagtacaagaacatagaattttatgacattgacaagtatggccca
taa
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