Quercus lobata (valley oak): 115977485
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Entry
115977485 CDS
T07350
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115977485
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
115977485
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
115977485
NCBI-ProteinID:
XP_030955219
LinkDB
All DBs
Position
1:9020377..9046350
Genome browser
AA seq
1975 aa
AA seq
DB search
MWTNVFKIGNLNQISWFQFLPHEADLNPLPDKGVKVEQKDTATLLVLSSHLQLQKEGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGHHSSVVENTQGAVSRLRVVASGIWLAPGD
SEEVAAALSQALRNRIERSLIGLSYMRFGDVFSKYCPSQSEEILRKGQPTVEFIFAATEE
AVFVHVLVSAKHIRALSSGEVERVLNRSSNNSGYRLPVIVSPHGIRGRLTGCCPSDLVKQ
VFFSSGRFKTSNGFIGLPHHVSQGSGCQMRGQNCYVEVTLGCPRSGSDNALQSNTVSTRN
LPKNHVAESPAVGRGDQKGSPDQLPVYEKTFIYPAEAVLVPVLHTSFARSSLKRFWLQNW
IGPSLPGSSFFMHCASNMDFMEGSTAEINGIHTRHGYNSSSNSNTSSIGSISSSSSESDH
KMSAGARELEADADSLTCRQSGLSSNDQSENDCTKMGSKRPRTGMGAATNALVQDASKSD
FSSMDVNNSAITGVANEQIVSQWDWDDDDRGMPMDIQALLSEFGDFGDFFENDTLPFGEP
PGTAESQALIFSAPDCGDVGSSPVGMMDVCDQMLLPGNFQSFENFDPPPPVAQEESLCKN
HEVANNSLSSGLVNHTAASSTGEFDHIIKAEALLTFASEYGAVETPTSELSSSIFRSPYF
PKSRKVESSNSSPNNYIYGATPPYSPCYDGSDEKTSMAMNSKPCPSDSKKYYTHVDAGKE
QHDKRSFSGNNSILTSEGAAPSTFSNLNSTNAVKSSLRKVTEGTLEVAHFLLSMKTVLAT
EVECIMFQASMCRIRHTLLASSSLSPIGFSRLTGSTVLNHLPGDQGTMTDDISGKYEVKK
KESIPVRIAGDFDGGVLDGHLNAPVGVWRSVGVPKVSKTSNSPSMEVSASLPHNSFHEEG
ILSFGKRQPLLELLDGMALLVQQATSSVDLALDGDCGDGPYGWLALQEQWRRGFSCGPFM
VHAGCGGTLASCHSLDIAGVELVDPLSTNVHASSAISLLQSDIKTALKSAFNTLDGPLSV
TDWCKGRNQSGDAGSAGDGFSADSSMSECRDSLSTVTHSVAEPISPSQSSAGGLSGLKVS
SAMDGAKVDESSQRRSNQEICNSDSEQQLCTRLRPTLFVLPLPAILVGYQDDWLKTSASS
LQVWEKAPLEPYALQKPITYSVICPDIDPLTTAAADFFQQLGTVYETCKLGSHSPQCLGN
QMEIDSGKGSSSGFVLLDCPQSMKIESSNASLVGSISDYFLSLSNGWDLTSYLKSLSKVL
KGLKLGPCLSTNPKEGSSGPCMVIYVVCPFPEPIAVLQTVIESSVAVGSVILQSDREKRL
ISHSQVGKALSCSAAVDEATISNVLVLSGFSIPKIVLQIVTVDAIFRVTSPSLHELVILK
ETAFTVYNKARRISRGSSNDMVQSSSLSSRSSSVMTQMSSPISGMWKDCVGPRITGHSLP
REGEIDASLRAGAWENSWQTTRTGGLSCEPIRTGDYSLQDEIRYMFEPLFILAEPGSVEH
GVSPAIFGNIVSESSKPDDSVAGFMQGSSSAGSADAGSSSQLDGSEPDGFGSSHQKTPPS
LHCCYGWTEDWRWLVCIWTDSRGELLDSHVFPFGGISSRQDTKGLQCLFIQVLQQGCQIL
QACSSPDIGVAKPRDFVIARIGSFFELEYLEWQKAINSVGGSEVKKWPLQLRRSVRDGIL
ASSNGASLQQQEMSLIQERNLPSSPSPLYSPHTKASGFIKGGLGQPAARKQLMGGHTVVD
SSRGLLQWVQSISFVSLSIDHSLHLVFQSDSSSPGGTQGGSSMGPSGYHEGFSPVKSLGA
TSASYILIPSPSMRFLPPSPLQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSM
RKDYRSNLKEEWPSVLSVSLIDYYGGTNILQDKIFRGVHKGRNLSSEAKDFEIETHLVLE
SVAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKESSRQPEKSQV
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaatgttttcaaaattggaaatcttaatcaaatatcatggttccagtttctt
cctcatgaagcagatttgaaccctctacctgataaaggtgtgaaagtagagcaaaaagat
accgctacattgttggtgctttcatcgcatctgcagttacaaaaggaaggatttctcagc
acctggaccaattcctttgtggggccctgggatccatctcagggtttgcacaatcctgat
gagaaaatcaagctatggctttttcttcctgggcatcattcatctgttgttgaaaacact
caaggtgcagtctccagattaagagttgttgcatctggaatttggttggctcctggggat
tccgaagaggttgctgctgccctttcacaggctttaaggaatcgtatagaaagatcactg
attggactttcctacatgagatttggagatgtattttcgaagtattgtccatctcaaagc
gaggaaattttgaggaaagggcaacctacggttgagttcatctttgctgccacagaagag
gcagtctttgtacatgttctagtatcagcaaagcatatcagggcactgtcaagtggtgaa
gttgaaagagtattaaaccgttcgtccaataattccggttacagacttccagtgattgtt
tctcctcatggaattcgtggtaggcttactggatgttgtccaagtgatcttgtcaaacaa
gtgtttttcagttctggcaggtttaagacttcaaatggatttataggtctaccacatcat
gtttctcaaggttctggttgccagatgaggggccaaaattgttatgttgaagttactctt
ggctgccctagatctggaagtgacaatgcgttgcaatcaaacaccgtttccacgagaaat
ttgcccaagaatcatgttgctgaatctcctgctgttggaagaggtgatcagaagggatca
ccggatcaattaccagtatatgagaagacattcatatatccagctgaggcagtgcttgtc
ccagtcttgcatacatcatttgcccgatcttctctgaaaagattttggctacaaaattgg
atagggccttcattacctggatcatctttctttatgcactgtgctagcaatatggatttc
atggaaggatcaacggctgaaatcaatggaatacacaccaggcatggttataatagtagt
agcaatagtaacaccagcagtattggcagcataagcagcagctccagtgagagtgatcac
aagatgtccgcaggagccagagaacttgaggcagatgctgattctttaacatgtagacag
tctggtttatcttctaatgatcagtcggagaatgattgcacaaaaatgggttcgaagcgt
cctcgaactgggatgggtgcagctacaaatgctcttgtgcaagatgcaagcaagtctgat
tttagttccatggacgtcaacaattctgccataacaggagttgcaaatgagcagattgta
tctcaatgggattgggatgatgatgacagaggtatgcccatggatatccaagctctgctt
tctgagtttggagattttggcgacttcttcgaaaatgacactttgcctttcggggagccc
ccaggaactgcagaatcacaggcgcttatcttttctgcaccagattgcggagatgtaggt
agtagtccagttgggatgatggatgtttgtgatcagatgctattgcctgggaattttcaa
tcctttgagaattttgatccacctcctccagtagcccaagaggagagtctctgcaaaaat
catgaagtcgcaaataacagtctgtcgtcaggtctggtgaaccacactgcagcatcttct
acaggtgagtttgatcatataataaaagctgaagcactgttgacatttgcttctgaatat
ggagctgtggagacccctacaagtgagttgtcctcatcgattttcagaagtccatatttt
ccaaaatctcgaaaagttgagagttcaaattcaagtcctaacaattacatttatggtgca
acaccaccctattctccttgctatgatggatctgatgagaagactagcatggccatgaac
tcaaaaccatgtcctagcgactcaaaaaaatattacactcatgttgatgcagggaaagag
caacatgataaaagatcattttcaggtaataatagtattcttacatctgagggggcggca
ccttctacattttctaatctcaattctacaaatgctgttaaatcttccctgaggaaagtg
actgaaggcacccttgaagtggcacatttccttttgtctatgaagacagtgcttgcaaca
gaagttgaatgcattatgttccaggcctccatgtgcaggattaggcacacactattagct
tccagtagcctttcacctattggttttagtagattaactggaagtaccgttttgaatcac
ctgcctggtgaccagggtaccatgacagatgatatatctggcaaatatgaggtgaaaaag
aaagaatctataccagttagaatagctggtgattttgatgggggagtgctggatgggcac
ctgaatgcacctgttggtgtctggcgctctgttggagttcctaaagtttcaaagacctca
aattctccaagtatggaagttagcgcttccttgcctcataattcattccatgaggaaggt
atcctttcttttgggaaaaggcaaccgcttctggagcttcttgatggaatggcattactt
gtccaacaagctacttcctctgttgatctggccctagatggagactgtggtgatggtcct
tatggttggcttgcattacaagagcagtggaggcgggggttttcttgtgggccttttatg
gttcatgcaggttgtggggggacactggcttcatgtcattccctagacattgctggtgtg
gagttagtggatccactttctactaatgttcatgcttcgtctgcaattagtttgttgcag
tcagacataaagactgccttaaaatccgcctttaacactttggatgggccattatctgtc
actgattggtgcaaaggccgcaatcaatcaggtgatgctggaagtgcaggtgatggattt
tctgctgattcttctatgagtgaatgtagagattctttgagtactgtaacacattctgtt
gcagagccaataagcccatcccagtcttctgctggtggattatctggccttaaagtgtct
agtgccatggatggagctaaggtggatgagtcatcccaaaggagatctaaccaagaaatc
tgtaattcagattcagagcagcaactatgcacccggctaagaccaacacttttcgtgctt
cctttgcctgctatacttgttgggtaccaggatgattggcttaagacgtccgcaagctcc
ctacaagtgtgggagaaggctcctcttgaaccatatgctttgcagaaacctattacttac
agtgttatatgtcctgacattgatccacttactactgctgctgctgattttttccaacaa
ctaggaactgtctacgagacatgtaaactgggtagtcattcaccacaatgtttgggaaac
caaatggaaatagattctggaaaagggtcatcttctggttttgttctactggattgtcct
caatcaatgaagatagaaagcagtaatgcatctcttgtgggctcaataagcgattatttt
ctttccctttcaaatggttgggacttgacgagctatctcaagtcactttcaaaggttcta
aaaggcttgaaacttggtccatgcttgtccacaaatccaaaagaaggaagcagcggtcct
tgtatggtaatatatgtggtgtgccctttccctgagcctattgcagttctacaaactgtt
attgaatcttctgttgctgttggatcagtcattctccaatcagatagagagaaaagattg
atatcgcacagtcaggttgggaaggctttaagctgctcagcagccgtggatgaagcaaca
atatcaaatgttctagtactttcggggtttagtattcctaaaatagtactgcagattgtg
acagttgatgccatttttagagttactagtccatcacttcatgagcttgtcattcttaaa
gagacagccttcactgtttacaacaaagctcgtagaatttcgcgaggatcctctaatgat
atggtccagtcatcatcattatctagtagatcttcctcagtcatgacacaaatgtcttct
cctatttcagggatgtggaaggactgtgtaggtcctcgaattactgggcattcccttcca
agagagggtgaaatcgatgctagccttagggctggtgcttgggaaaattcttggcaaaca
acaaggactggggggttaagttgtgagccaattagaactggagattactccctgcaagat
gaaattcgttacatgtttgaacctctttttattctagcagaacctggttctgtggagcat
ggagtttcacctgcaatttttggtaacatagtatcagaatcttcaaagcctgatgatagt
gttgcaggctttatgcagggttcaagttcagcaggaagtgcagatgctggatcaagctct
caacttgatggatctgaacctgatggctttggatctagccatcaaaagactcctccaagc
ctgcattgttgttatggatggacagaggattggcgttggctagtatgcatctggacagat
tcaaggggagaattgcttgacagccatgtattcccctttggtggaatcagcagcaggcag
gacacaaagggtctgcaatgccttttcattcaagttctgcagcaaggctgtcagatactt
caggcctgctcttctcctgatattggtgtagccaagcctagagattttgtgattgcacgc
attggaagtttctttgaacttgaatacctagagtggcagaaagccattaattcagttggg
ggttctgaggtgaaaaaatggcctcttcaactgcgacgatctgtgcgtgatggaattctt
gcaagcagtaatggtgcatccttacagcaacaggaaatgagtttgattcaagagagaaac
ctaccttcctcacctagtcctttgtatagccctcacaccaaagcttctggatttataaaa
ggtggtttaggacaacctgcagctagaaagcagcttatgggtggccatactgtggttgac
agctctagaggtttgcttcagtgggtgcagagtatcagttttgtttcactttcaattgac
cattctttacatttagtttttcaatcagattcgtcatcccctggaggtactcaaggtggt
agtagtatggggccatcaggctatcatgaagggttttcccctgtaaagtctctcggtgct
acatctgcttcatacattttgatcccatcacccagcatgcgctttctccctccatcacct
cttcagctcccaacatgcctcactgctgagtcacctcccctggcccatctccttcacagc
aagggctctgcaattccactttccactggttttgtggtttcaaaagctgtaccttccatg
aggaaagactatagaagcaacttgaaagaagaatggccttctgttctttctgtcagtctt
attgattattatggaggcactaatattttgcaagacaaaatttttcgaggtgtccacaaa
ggtaggaatttaagctcagaggctaaagattttgaaattgaaacccatttagttcttgag
tctgttgcagcagagcttcatgcgctatcatggatgactgttagccctgcatacttagag
cgacgaactgcattacctttccactgtgacatggttttaagactcagaaggcttcttcat
tttgctgataaagagagctctcggcagccagagaagtcacaagtgtag
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integrated database retrieval system
