KEGG T07350: 115978145

Quercus lobata (valley oak): 115978145

Entry

115978145         CDS       T07350

Name

(RefSeq) E3 ubiquitin-protein ligase ATL42-like

K10664

E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]

Organism

qlo Quercus lobata (valley oak)

Brite

KEGG Orthology (KO) [BR:qlo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:qlo04121]
    115978145
Enzymes [BR:qlo01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115978145
Ubiquitin system [BR:qlo04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    115978145

SSDB

Motif

Pfam:

zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf_RING_Vps8_fungal Prok-RING_4 Prok-RING_1 zf-RING-like zf-RING_16 SLX1_C zf-RING_4 VPS18_RING_C

Other DBs

NCBI-GeneID:

115978145

NCBI-ProteinID:

XP_030956030

LinkDB

Position

2:43020608..43022141

AA seq 422 aa
MNKFLLLILVLHFMFINVKAQMAGDNQAASQPVQPSLAVVIGILSIMFSLTFLLLVYAKF
CHRRGSIHSDPQNFGFIRSSSRFSGIDKTVIESLPFFRFSSLKGTKEGLECSVCLSKFED
TEMLRLLPKCKHAFHIDCIDNWLIKHSSCPLCRHKVSPEDPTIFTYTNSMRLMNQSELRQ
DSNIELFVQREEDHHGSSRFSIGSSFRKTEKGNTEEKPLIFQEEADNNDENNKVLHKHNH
KIIVSDFIFNNRWSSVSSSDLMFLNSELLSATSSYRFSSLDWNNEQSSTPRSLENGHIVK
IKEEMELKRSFETKVSTLNKTSPVSFPGLPSTSDSTPNLSQTSRYMNPTERRSMSEITAL
SRYEDISGIKNRIRESSLIENNVKAERMRRLWFPIAKRTVKWYANRERRSQQSQNTQRVL
DV

NT seq 1269 nt +upstreamnt +downstreamnt
atgaataaatttcttttgctaattttggttctccatttcatgttcatcaatgtcaaagca
caaatggcaggggataatcaagctgcttcacaacctgtgcaaccaagtcttgcagttgtc
ataggtatcctctcaatcatgttttcattaacatttcttcttcttgtctacgccaaattc
tgtcacaggagagggtccattcacagcgatccacaaaactttggatttattagatcaagc
tctcgattttctgggattgataagacagtgattgagtcacttccattctttagattctct
tcacttaaggggacaaaggaaggacttgaatgctcagtctgcctatccaaattcgaagat
actgaaatgcttcgattgctgcccaagtgtaaacatgcctttcacattgactgcatcgac
aattggcttataaagcattcaagctgtcctctttgcaggcataaggtaagccctgaggac
ccaacaatttttacatacacaaatagtatgagattgatgaaccagtctgagctgagacaa
gactctaatatagagctctttgtccaaagagaagaagatcatcacggatcttcaagattc
agcattggaagcagctttcgaaaaactgaaaagggtaatacagaagaaaaaccattaata
ttccaagaagaagctgacaataatgatgaaaacaacaaagtcttgcacaagcacaaccac
aagattattgtatctgactttattttcaacaaccggtggagcagtgtgagttcttcagac
ctgatgttcttgaactcggagttgcttagtgctacatcaagctatagattctcttctttg
gattggaataacgagcagtcctcaacacccagatctttagaaaatggacatattgtgaag
attaaagaggagatggagttgaagagatcatttgagaccaaggttagtacactcaacaaa
actagtccagtttcatttccgggtcttccttctacatcagattccacaccaaatttgagt
cagacatcaaggtatatgaatccaaccgagagaagatcaatgtcagaaataactgcactt
tcaagatatgaagatatttctggtataaagaacagaattagagagtcttctttgattgaa
aacaatgttaaagcggaaagaatgaggcggctttggttcccaattgccaaaagaacagtt
aagtggtatgccaatagagaaagaaggtcccaacagtctcagaacacacaacgagtatta
gatgtataa

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