Quercus lobata (valley oak): 115978337
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Entry
115978337 CDS
T07350
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115978337
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115978337
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Carla_C4
Motif
Other DBs
NCBI-GeneID:
115978337
NCBI-ProteinID:
XP_030956220
UniProt:
A0A7N2L017
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Position
2:80670056..80672779
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AA seq
438 aa
AA seq
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MVAAKLSFILFASFAVLIPGLQANIAEYDEFWLQRAEEARKDALEAYHPNPEEITEQFNT
HVNEVFERTNSTRRSLGQKKYTGPCRATNPIDRCWRCKKNWATNRKGLVKCVLGFGRKTT
GGKRGKYYIVTDSSDNNAMAPKPGTLRHAVIQKKPLWIIFAHSMVIKLSQELIVSSHKTI
DARGANVHIAYGAGITIQFVKNVIIHGLHIHDIVSAPGGTVRDSVDHVGFRTASDGDGIS
IFGSTNIWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDTFEGDKKMQ
VTVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPNV
AAKEVTKRDYATQDVWKNWTWRSEGDIMMNGAFFVQSGNPSKKRPYSKKDMIKAKPGTFV
TRLTRFSGSLNCKVGRPC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagctaagctaagtttcattcttttcgcttcctttgctgtactaatcccaggc
ctccaggccaatattgctgaatacgacgagttttggctgcaacgagccgaggaagcaagg
aaggatgccctcgaggcctatcacccaaacccagaagaaatcactgagcaattcaacacc
catgttaatgaggtcttcgagaggaccaacagcacaaggaggagtctaggtcaaaagaaa
tacacaggtccatgcagggccacaaacccaattgaccggtgctggagatgcaagaaaaat
tgggctacaaaccgcaagggtttggttaaatgcgtcctagggttcggacgcaagactact
ggaggaaagcggggaaaatactacattgtcacggattcctctgacaacaacgcgatggca
ccaaagccgggaactctacgtcacgccgtgatccagaagaagcccttgtggatcatattt
gcacacagcatggtgatcaagttgtcccaggagttgattgtgagctcacacaagaccatt
gatgcacgcggggctaatgttcacattgcctatggtgctggaattaccattcagtttgtt
aagaacgtgatcatccatgggcttcacatacatgatattgtttcggcaccaggtggcacg
gttagggactctgtggaccatgtggggtttaggacagcgagtgatggagatggaatttct
atctttggatccacaaatatttggcttgatcatctttctatgtccaattgccaagatggt
cttattgatgccattcaaggatccactgccatcaccatttcaaactcccacttcacccat
cacaacgatgtaatgttgtttggtgcaagtgacacctttgaaggtgataaaaaaatgcaa
gtcacagtggcgttcaatcattttggaaggggattggtgcagagaatgccaaggtgcaga
tggggtttcttccatgttgttaacaacgactacactcactggcttatgtatgccattgga
ggtagccaacaccctaccattataagccagggcaaccgcttcattgctccacctaacgtt
gctgcaaaggaggtgacaaagagggactatgccacgcaggatgtatggaagaactggaca
tggaggtcagaaggagatattatgatgaatggagcattctttgttcaatctggaaaccct
agcaagaagagaccatacagcaagaaagacatgatcaaggcgaagccagggacatttgtc
actagactcactcgcttttcaggttcactaaactgcaaagttggaagaccatgttag
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