Quercus lobata (valley oak): 115978741
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Entry
115978741 CDS
T07350
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115978741
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115978741
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
115978741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Prok-RING_1
DNA_ligase_ZBD
zf-Nse
Baculo_RING
Arc
RINGv
zinc_ribbon_16
Prok-RING_4
Rtf2
PHD_NSD
DUF3899
PHD
Zn_ribbon_IFT122_C
SLX1_C
DUF1272
zf-RING-like
Tmpp129
Motif
Other DBs
NCBI-GeneID:
115978741
NCBI-ProteinID:
XP_030956459
UniProt:
A0A7N2R0M4
LinkDB
All DBs
Position
3:4566817..4568225
Genome browser
AA seq
385 aa
AA seq
DB search
MLFSSNPNRPIWTLIGILYICPEVMIKWAAAQPGPDSQYQYAKFSPSMAIIVVVLIAALF
FMGFFSIYVRHCSQASSSSNSVRMRGLSRRAAAARGLDAAVIETFPTLVYSAVKGLKIGK
GALECAVCLNEFEDDERLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLVPEPGESVHR
LVELDPPELDLEGQYDDGLESVHNREAEVEEVGEGEREKEKDEMLEVLNVNQTLKRNRTR
GGGSRSNRVRKLLFPRSHSTGHSLVQPGENTDRFTLRLPVEVRKQVMNRQLNRATSMVLL
PREGSSRLGYRNGGEESNRGKSYRRLEKLDPMVKSDRWVFTMAPPFLVRASSLRSPRVAT
NSGEGTSAQPVRPVGFVSDSARPPV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcagctccaatcccaaccgtccgatctggactctgatcggaattctttatata
tgtccggaggtgatgatcaaatgggccgcggcccagcccggcccagactctcagtaccag
tacgcgaagttcagcccgtcgatggcgataatcgtggtggtgctgatcgccgctcttttc
ttcatgggctttttctcgatctacgtccgccactgctctcaggcctcgtccagctccaac
agcgtccgaatgagaggcctctcccgacgcgctgccgcggcgcgtgggctcgacgcggcg
gtcatcgagacgttcccgaccttggtctactccgccgtcaaggggctcaagatcgggaag
ggcgcgttggagtgcgcggtgtgtctgaacgagttcgaggacgacgagaggctgcgcttg
attccgaaatgcgaccacgtgttccaccccgagtgcatcgacgcgtggctggcttcgcac
actacttgcccggtttgtcgggctaatctcgttcccgaaccgggcgagtcggttcaccgg
ctcgtcgagctggacccgcccgagttggacctcgaggggcaatacgacgacggtttggag
tctgtgcacaacagagaggcggaagttgaggaagtgggagagggagagagagagaaagaa
aaggatgaaatgttggaggttttaaatgtgaatcaaactttgaagaggaaccgtacacgt
ggcggtggatctcgatccaaccgtgtgcggaagttgttattcccgcggtcccactcgacc
ggacactccctggtccaaccgggtgagaacacggaccggttcactctacggcttccggtc
gaagtgaggaagcaagtaatgaaccggcagttgaaccgggccacgagcatggttttgttg
ccgagggaagggagttcgaggctagggtatcgaaatggtggagaggagagtaatcgaggg
aagagttataggcggctcgagaaattggacccgatggttaagtcggaccgctgggtgttt
accatggcaccaccattcttagtgagggcatcatcattgaggtcaccaagagtggcaaca
aatagtggtgaaggaacttcggcccaaccagttagaccagtggggtttgtaagtgactcg
gctcgacccccggtttaa
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