KEGG   Quercus lobata (valley oak): 115978777
Entry
115978777         CDS       T07350                                 
Name
(RefSeq) nuclear pore complex protein NUP54
  KO
K14308  nuclear pore complex protein Nup54
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115978777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qlo03019]
    115978777
Messenger RNA biogenesis [BR:qlo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115978777
SSDB
Motif
Pfam: Nup54
Other DBs
NCBI-GeneID: 115978777
NCBI-ProteinID: XP_030956501
UniProt: A0A7N2L8Y1
LinkDB
Position
3:53754709..53758461
AA seq 361 aa
MFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPTTPSFAGGFGSSLFSTPFSSQQQQQQQQ
QQQTSLFQQQSPSTGFGFQSTPFSTPQPTPFPNAQLTTQMAPVSPLPFSLADRDIQAIVD
AYKEEPGNPKYAFKHLLFSVTDPQFRVKPAGVSDIMWAEAMGKLEGMESADRERLWPQLV
QGFKDLSQRLKLQDDVIVSDAERLRITQSNVKMLQRHLQADTLPLIERMRQKEQGLQRRL
LRVMRMVEALEGKGFRLPLMKGEVELAEKLAAITRQLKGSGAELSRRVQNLLTLSRVQAN
GIGAGGSVYLPGSTKIHEQSLVDMQEVVQQQTEAIARLGNVLKRDIRDMEIIMAEDTELT
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgttcggcactccgtcctccaccccagcattcggcactccttcctccactccagcattc
ggcactccgtcttcaactccagctttcggcactccaacgacgccgtctttcgccggcggt
ttcggctcttctctcttctccacaccattctcctctcaacaacagcagcagcaacagcaa
cagcaacagacttcgttgtttcagcaacagtcgccatctaccggtttcggcttccaatcg
acgccgttttctacgccgcagcccactcctttccccaatgcgcaattgactactcagatg
gctcctgtgtctcctctccctttctctctcgccgatcgcgatattcaagcgattgtcgat
gcttataaagaagagcctggaaaccctaaatatgctttcaagcatttgttgttcagcgta
acggatccgcagttcagggtgaagcctgctggtgtatcagatattatgtgggcggaggca
atgggaaagctggaaggtatggaaagtgctgacagggagcgcctatggccccagctcgtt
cagggttttaaggatctttcacaacgtcttaagctccaagatgatgtcattgtttcagat
gctgagagattgcgaattacccaaagcaatgtgaagatgcttcaaagacatttgcaagct
gacactcttccgttgattgaaagaatgagacagaaagagcaaggtcttcaaaggcgtctt
ttaagggtaatgagaatggtggaggcattggagggtaagggtttccgattacccttaatg
aaaggggaagttgaattggctgagaagttagctgcaataactagacagctgaaaggatct
ggagcagaactttctagaagagtacaaaacctgctgactttgtcccgtgttcaagcaaat
ggcattggtgccggaggttctgtttatcttccaggatcaaccaaaatacatgaacagagt
cttgttgatatgcaggaggttgtacaacagcagacggaggccattgctaggcttggcaat
gttttgaagagagatatcagggacatggagatcattatggccgaggacacagaattgaca
gattga

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