KEGG   Quercus lobata (valley oak): 115978798
Entry
115978798         CDS       T07350                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03010  Ribosome
qlo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    115978798
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115978798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:qlo03011]
    115978798
   04121 Ubiquitin system [BR:qlo04121]
    115978798
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:qlo04147]
    115978798
Ribosome [BR:qlo03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    115978798
  Archaea
    115978798
Ubiquitin system [BR:qlo04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   115978798
Exosome [BR:qlo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115978798
  Exosomal proteins of colorectal cancer cells
   115978798
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD UBL_UBAC1 Ubiquitin_5 DUF2604 Thioredox_PDIA6_C OTU1_UBXL Fer2_3
Other DBs
NCBI-GeneID: 115978798
NCBI-ProteinID: XP_030956528
UniProt: A0A7N2LAE0
LinkDB
Position
3:59276893..59277625
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAILQFYKVDDSGKVQRLRKE
CPNSECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctaacgggcaagaccatcaccctcgaggtcgagtcctca
gacaccatcgacaatgtgaaggccaagatccaagacaaggaaggaatcccgccggaccag
cagcgcctcatcttcgccggaaagcagcttgaggacggccgaaccctagccgactacaac
atccagaaggagtcgaccctccacctcgtgctccgcctccgcggcggcgctaagaagcgc
aagaagaagacctacaccaagcccaagaagatcaagcacaagcataagaaggtgaagctc
gcgatccttcagttttacaaggtggatgattccggaaaggtccagaggcttcgtaaggag
tgccctaactctgagtgcggcgctggaactttcatggcgaaccactttgaccgtcactac
tgtggcaagtgtggcttgacctatgtgtaccagaaggctggtggtgattag

DBGET integrated database retrieval system