Quercus lobata (valley oak): 115978945
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Entry
115978945 CDS
T07350
Name
(RefSeq) LOW QUALITY PROTEIN: ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115978945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115978945
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
qlo03037
]
115978945
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115978945
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
115978945
Chromatin remodeling factors
SRCAP complex
115978945
INO80 complex
115978945
INO80 complex (yeast)
115978945
SWR1 complex
115978945
ASTRA complex
115978945
Cilium and associated proteins [BR:
qlo03037
]
Motile cilia and associated proteins
Dynein assembly factors
115978945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
bpMoxR
Mg_chelatase
AAA_18
DnaB_C
AAA_16
AAA_11
AAA_25
AAA_28
Cdc6_lid
IstB_IS21
AAA_33
TsaE
Zeta_toxin
AAA_7
DUF5887
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
115978945
NCBI-ProteinID:
XP_030956733
LinkDB
All DBs
Position
1:complement(11835441..11843114)
Genome browser
AA seq
456 aa
AA seq
DB search
MDKVRIEEVQSTTKKQRIATHTHIKGLGLEASGRALPLAAGFVGQAEAREASGLVVDMIR
QKKMAGRELLMAGPPGTGKTALALGIAQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
QAIGLCIKENKEVYEGEVTELSLEEAESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALFKEKVAVGDVIYIEANSGAVKRVGRSGAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDXLMGQMMKPRKTEITDKLRQEINKVVNQYIDEGVAELVPGVL
FVDEVHMLDMECFXYLNCALDSSLSPIVIFATNRGFSNVRGTDMNCPHGIPVDLLDRLVI
IRTQTYDVADMIKILALHANVEDLVIDDESLAYLGDIGLQASLRHAVQLLSPSSIMAKMN
GRDNICKADIEEVKALYMDAKSSARLLQAQQEKYIS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggataaagtgagaatagaagaggtacagtccactacgaagaagcagcgcatcgctact
cacactcacatcaaaggtcttggccttgaggccagtggaagagcattgcccttggctgct
gggtttgtgggtcaggcagaggcaagggaagcatctggtcttgtagttgatatgatacgg
cagaagaaaatggctgggcgggaacttctaatggctgggcctcctggtactggaaagaca
gctctggctcttggaatagcacaggaacttgggagcaaggttccattctgcccaatggtt
gggtcagaagtgtactcatcagaagtaaagaaaactgaggttttaatggaaaactttcga
caggccattggtctatgtatcaaggaaaataaagaagtctatgaaggagaggttactgaa
ctttccctggaagaagctgagagtgtgacaggtggctatggtaaaagtattagccatgtg
atcattggattaaaaactgtgaaaggaaccaagcaactgaagttggacccaaccatttat
gatgccttgttcaaggagaaggtggctgttggtgatgttatatacattgaagcaaatagt
ggagcagtaaagagggtgggcagaagtggcgcttttgctacagaatttgaccttgaagca
gaagagtatgttccacttcctaaaggagaggttcacaaaaagaaggagatagttcaggat
gtaacactacatgatctggatgctgcaaatgcacggcctcaaggtgggcaagatnnacta
atggggcagatgatgaagcctaggaaaacagaaatcactgacaagttaagacaagaaatt
aataaggttgttaaccagtacattgatgaaggtgtagcagaacttgtccctggagttcta
ttcgttgatgaggtacatatgctggatatggaatgctttntatacttgaattgtgcttta
gatagctcactatctccaatagtaatctttgccacaaacagagggtttagcaatgtgaga
gggactgatatgaactgtcctcatggcatacctgtcgacttgttggatcggttggttatt
atccgaacacagacttatgatgttgctgacatgataaagattttggctctccatgcaaat
gtggaggacctagttatagatgacgaaagtttggcttacctgggtgacattggtctacaa
gcatccttaaggcatgcagttcagctgttatcgccctccagtattatggcaaaaatgaat
ggccgcgacaatatctgcaaggcggatattgaggaagtgaaagctctctatatggatgca
aagtcttcagcaagacttcttcaagcgcagcaggaaaaatacatttcatga
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