Quercus lobata (valley oak): 115979049
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Entry
115979049 CDS
T07350
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115979049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115979049
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115979049
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115979049
RNA polymerase I system
115979049
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
115979049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
PylS_N
Motif
Other DBs
NCBI-GeneID:
115979049
NCBI-ProteinID:
XP_030956862
LinkDB
All DBs
Position
3:73670937..73675161
Genome browser
AA seq
119 aa
AA seq
DB search
MGSGNVPPAQIPTSFGHELRACLRCRLIKTYDQFRESGCENCPFFKMDEDHERVVDCTTP
NFNGIISVMDPTKSWAARWLRIGKFAPGCYTLAVSEALPEDLKNLCEDERVQYLPPKGV
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgggaacgttccaccggcgcaaattccgacgagcttcggacatgaacttcga
gcttgccttcgttgtcgcctcatcaaaacctacgatcagttcagagaatcaggatgcgag
aactgtcccttcttcaaaatggacgaggatcacgagcgtgtcgtcgattgcactactcct
aatttcaacgggataatttcagttatggatcctactaaaagttgggctgctcgctggtta
cgaattggaaaatttgcccctggctgttacactcttgcagtctcagaggctcttcccgag
gacttgaagaatttatgcgaagatgagcgtgtgcaatatttgccaccaaaaggtgtatga
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