Quercus lobata (valley oak): 115979461
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Entry
115979461 CDS
T07350
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115979461
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115979461
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115979461
NCBI-ProteinID:
XP_030957370
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Position
3:56058238..56059888
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AA seq
388 aa
AA seq
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MALKGVNIAILWHFALALVIVMLSTPNVSLAKKTKIIGLKMNAIDHCWRWNPDWRRNRQQ
LATCSVGYAGKMANNIGRGLTQYVVTDPSDNPINPKPGTLRYGTTMIKGKKWITFLRSMR
IRLQKPLLISSFTTIDGRGANVHIAGNACLMIYKQSNIIIHGLRVHHCRSQPPSTVMGPD
SKIISLGQVDGDAIRLVTASKVWLDHNTLYESEDGLLDVTRGSTDITISNNWFKNQDKVI
LLGHDDGFLRDKNMKVTVMYNHFGPNCNQRMPRIRFGYAHVVNNLYQGWMQYAIGGSMNP
SVKSQANLFIAPKLGNKEVTWRNGEKGTWKFYSVNDVFENGARFIETGAGGVKPNYNHEQ
VFQVADARTVRSLTKSAGALRCSPRSRC
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaaaggtgttaacattgccattctttggcactttgctttggctcttgtcatt
gtcatgctctccactcctaatgttagtcttgctaagaaaacaaaaatcattggcttgaaa
atgaatgcaattgatcattgttggagatggaaccctgattggcgaaggaatagacaacaa
cttgccacatgttcagtgggttatgctgggaagatggccaacaatattggaaggggcctc
acacaatatgtagtcactgatcctagtgacaacccaataaatcctaaaccagggacctta
agatatggaacaaccatgatcaaagggaaaaaatggatcacattccttagaagcatgcgc
attagacttcaaaaaccacttctcattagtagtttcacaaccattgatggtcgaggtgct
aatgttcacattgctggtaatgcatgtttgatgatctataagcaaagcaacataatcatt
catggtcttcgtgtccaccattgccggtctcaaccacctagcacagtaatgggtccagac
tcaaagataatttcactaggtcaagttgatggagatgcaattagattggttactgcatcg
aaggtctggcttgaccataatacactttatgaaagtgaggatggtctacttgatgtcact
cgaggttctacagatatcaccatctctaacaactggttcaaaaatcaggacaaggtcata
ctccttggacatgatgatgggttcttacgtgacaagaacatgaaggtcacggtcatgtac
aaccattttggacctaattgcaatcaaaggatgccaagaattcggttcggatatgcacat
gtggtgaacaacctttaccagggatggatgcaatatgctatagggggaagcatgaatcct
agtgtcaagagtcaagccaacttgttcattgcaccaaaattagggaacaaagaggtgacg
tggagaaatggtgaaaaagggacatggaaattctactctgtgaatgatgtatttgaaaat
ggagctagattcattgaaacgggtgctggtggggtaaagccaaactataaccatgaacaa
gtttttcaagttgcagatgcaagaacagtgaggtcattgacaaaatcagcaggtgcttta
cgatgctccccacgatctagatgctga
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