Quercus lobata (valley oak): 115979515
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Entry
115979515 CDS
T07350
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
qlo
Quercus lobata (valley oak)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
AAA_30
CMS1
YgbB
ERCC3_RAD25_C
zf-CCHC_5
zf-CCHC_4
Cas3-like_C_2
zf-CCHC_2
DUF1059
Motif
Other DBs
NCBI-GeneID:
115979515
NCBI-ProteinID:
XP_030957430
UniProt:
A0A7N2L4X7
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Position
3:11431641..11439481
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AA seq
757 aa
AA seq
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MTSFIGVSSIYQTPTLELYRRTTPTTAATKDNKSLLHFNYVLKAYYNTNQTHKPHHSLSL
VPSAIATSNSSVLSEEAFKGLGALDAYYDDDDDDNNNSSGAATSTSPEDDHELAVSELGL
PQRLVQSLHTRGITHLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKQLTEEDE
QRGSHRRSGSLPRVLVLAPTRELAKQVEKEIKESAPYLNSVCVYGGVSYVTQQNALSRGV
DVVVGTPGRIIDLINGGSLKLGEVQFLVLDEADQMLAVGFEEDVEVILEKLPSKRQSMLF
SATMPGWVKKLARKYLDNPLTIDLVGDREEKLAEGIKLFALSATATSKRTILSDLITVYA
KGGKTIVFTQTKRDADEVSMSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDV
AARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTSSQRRTVRSLERDV
GCKFEFVSAPAVEEVLESSAEHVVATLSGVHPESVEFFTPTAQKLIEEKGIGALAAALAQ
LSGFSRPPSARSLINHEQGWVTLQLTRDPAYSSRYLSARSVTGFLSDVYPAAADEVGKIY
IIADERVQGAVFDLPEEIAKELLNRQTPLGNTLSKITKLPALQDDGPASDSYGRFSGRDR
NNRRGSRDRGGFRTSRGWGSGRGSDSDDGLFKSSSRSFRSDNSWSRNSKSSGDDWLIGGR
RSNTNRSSSRDRSFGGSCFNCGRSGHRASECPSKQDY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcttttataggcgtctcatccatttaccaaactcccactctggaactctataga
agaacaaccccaacaacagcagccactaaagacaacaagtcccttcttcacttcaactat
gttctcaaagcctattacaacaccaaccaaacccataagcctcaccactctctcagtttg
gttccctccgctattgccacttctaattcctcagtcctcagtgaagaggctttcaaaggc
ctcggtgctctcgatgcttattacgatgacgatgacgatgacaacaataattcttccggc
gctgctacttctacttctcctgaggacgaccatgagctcgccgtttccgaactgggcttg
cctcaacgccttgttcaatcccttcacacacgtggcattactcacctcttccccattcaa
agagctgttttagtccctgcactagaaggtcgagatatcattgctcgtgcaaagactggg
actgggaagacattagcctttgggatcccaattattaaacaacttactgaagaggatgaa
caaagaggctctcataggcggtctggttctcttcctagagttctggttcttgcacctaca
cgtgagctagcaaagcaagttgaaaaagagattaaagagtctgcaccttatttaaattct
gtttgtgtttatggaggggtttcttatgtgacacagcagaatgcactttcccgtggagtt
gatgtggttgttggaactcctggtcgaataattgacctgataaatggtggcagcctcaaa
ctaggggaagttcaatttttggtccttgatgaagctgatcagatgcttgcagttggtttt
gaggaggatgtggaagtaattttagaaaagcttccatctaagcgccagagcatgcttttc
tccgccactatgcctggttgggtgaagaaattggcacggaaatatttggacaatccattg
accattgatttggttggtgatcgagaagaaaagcttgcagaagggatcaagctctttgct
ctatcagccactgcaacttcaaagcggaccattcttagtgatcttataacagtttatgct
aaaggtgggaagaccattgttttcacacagacgaaacgtgatgccgatgaagtctcaatg
tcattaacaaatagcatagcttctgaggcattgcatggagatatatctcagcatcagagg
gagagaacattaaatggttttcgacaagggaaatttacggtgcttgttgccactgatgtt
gcagctcgtggactcgatatccccaacgttgatctagttattcactatgaacttcccaat
gatccagagacttttgtgcatcgctctggtcgtaccggacgagcaggaaaggaaggtaat
gccattctgatgtttactagtagccagaggagaacggtcagatcccttgagcgtgatgtg
ggctgtaagtttgagtttgttagtgcaccagctgttgaagaagttttggagtcatctgct
gagcatgtagttgctactcttagtggagttcatcctgaatctgtagagtttttcacccca
actgcacaaaaattgattgaagaaaagggaataggcgctcttgctgctgcactagcacaa
ttgagtggattctcccgacctccttcagcccgatctctcatcaatcatgagcagggatgg
gttacattgcaactgactcgagatccagcttattctagtagatacctgtctgctagatcc
gtcactggctttctttcggatgtttatccagcagctgctgatgaagttggaaagatttat
ataattgcagatgaaagggttcaaggagcagtttttgatcttccagaggaaattgcaaag
gagttactgaataggcaaacaccacttggaaacacactctccaagatcaccaagttgcct
gctctgcaagatgatgggcctgcaagtgattcctatggcaggttttctggtagggatcgg
aataatagacgaggatctcgagataggggaggttttagaacatcacggggttggggcagt
ggccgaggctctgatagtgatgatggtttatttaagagtagtagtcgaagttttagatct
gacaacagctggtcacgaaattcaaaaagcagtggggatgattggctaattggaggtaga
cgatcaaacactaacaggtcatcatcccgggacagaagctttggaggttcgtgttttaat
tgtggccggtctgggcacagggcatcagaatgcccaagcaagcaagactattaa
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