Quercus lobata (valley oak): 115979940
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Entry
115979940 CDS
T07350
Name
(RefSeq) E3 ubiquitin-protein ligase hel2-like isoform X1
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115979940
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115979940
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115979940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
HORMA
Motif
Other DBs
NCBI-GeneID:
115979940
NCBI-ProteinID:
XP_030957918
UniProt:
A0A7N2L555
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All DBs
Position
3:9615093..9622061
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AA seq
826 aa
AA seq
DB search
MDDSCVVCAETLLWVAYGSCGHREVCSTCVIRLRFICDDRRCCLCKSESNIIFVTKALGD
YTRMINDFSVFPADPIEGQVGQYWYHEGTQAYFDDMDHYKMIKAMCRLSCIVCDKKNEQR
NEGSKRRAGFKNIEQLRGHLFHQHRLFMCSLCLEGRKIFISEQKLYEKSQLNQHIKTGDS
EVDGTESERGGFMGHPFCEFCQNPFYGDNELYLHMSTEHYTCHICQRCHPGQYEYYKDYD
DLEIHFRQDHHICENEACIAKKFVVFTNESELKRHNAMEHGGHMSRCKRNAALQIRTSFQ
YRRNEQDRQGRGCVSHSDLSDNRLSLAIQASLETANTEHHHHASSSAQAVSNHQARDTAS
ITNAFESLATTESETPSRQSRASAQNTLEESSFPPLPVASRRSRQKFRNHSEWNTMAACL
RRRNNGTVTVLHSSQAWPAASHLTSSSTSSSLSNLPSSSQRKPVKVNESSSSSYTSPAQS
RLATAHLVASSNFSVLPRISGSTNQVGHSVSNTNLVDRRSFDTSLSSFPPVSSSQTNKAP
SSSHPLPKVEDVQNANKNLVEKIRAALEFDENKFAAFREISTEYRQGVIDAGEYLAYVFQ
FGLSHLVLELARLCPDPRKQKELVETYNFNMTVGSSENISSSDGGRSKNKKSSKKGKEKC
EANGFHNSKDALADSIISSVKSFQSNYKPSEDEVEVLSKDGYRSTKGKLKASVDDELSNL
ISTHHSRMEPKSENGSHLAGGGSAKNVETGGVGNKPKKKISKFLRNRLGNDATELLDLGD
SDPGPGQTEEKSDGGKEPPGGWPVRGVWQNGGGRRLVSITQRDPRK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgcgttgtctgtgctgagacacttttgtgggttgcatatggatcatgt
ggccatcgggaggtctgctccacctgtgtcattcgtctccgtttcatctgtgatgatcgt
cgttgctgcctttgcaagtctgaatcaaatatcatctttgtcactaaggctttaggagat
tatacaaggatgattaatgacttttcagtttttccagctgatccaatagagggtcaagtt
ggacaatattggtatcatgaaggaacacaagcatattttgatgatatggatcactacaag
atgataaaggccatgtgcagactatcatgcattgtttgtgataagaaaaatgaacaaagg
aatgaagggtcaaagaggagagcagggttcaagaacattgagcagctgagaggccatttg
ttccaccaacataggctgttcatgtgcagtctatgtttggaaggtaggaagatatttatc
agtgagcaaaagttatatgaaaagtcacaattaaatcagcatataaagacgggtgattcg
gaggttgatggcactgaaagtgaaagaggtggatttatgggacatcctttctgtgaattt
tgccaaaatccattctatggagataatgagctgtacttgcacatgtccactgaacattat
acttgccatatatgccaaaggtgccatccaggacaatatgagtactacaaggattatgat
gacttggagatccattttcgtcaagaccatcatatatgtgagaatgaggcctgcattgct
aaaaaatttgttgttttcacaaacgaatctgaactcaagaggcataatgccatggagcat
ggagggcacatgtctcgctgcaagaggaatgccgctcttcagatacgaacaagcttccag
taccggcgaaatgagcaagatcgtcaaggtagaggatgtgtctctcattcggatttgtca
gacaatcgactttctttggccattcaagctagtcttgagacagccaatacagaacatcat
catcatgcttcatcaagtgcccaagcagtttccaatcaccaagcaagggatactgcatca
atcacaaatgcatttgaatcattagctaccacagaatctgagacaccttcaagacaaagc
cgtgcttcagcacaaaacacactggaagaatcatcctttcctccactacctgtggcttca
aggagaagtcgacagaaatttagaaatcattcagaatggaacactatggctgcttgcctt
cgtcgccggaacaatggaactgtaactgttcttcattcttctcaagcttggccagcagca
agtcatttaaccagctcatcaaccagtagctcattatctaatcttcctagttcttcccag
aggaagcctgtgaaggttaatgagtcttcatcatctagttatacaagccctgctcagtct
agactagccacagctcatctagttgcatcgtctaatttttctgttttgccaaggatttca
ggtagcaccaatcaggttggccactctgtttcgaatacaaaccttgtagatagacggtct
tttgatacttctctctctagttttcctccggtttcttcctctcaaactaataaggcaccc
tcaagtagccacccactgccaaaggtggaagatgttcaaaatgctaacaagaatctggtg
gagaaaattcgtgctgctttagaatttgatgagaacaaatttgctgcattcagagaaata
tctacagagtatcgccagggcgtaattgatgcaggggaatatcttgcctatgtttttcag
tttggtctgtcacatcttgttcttgagctagctagactctgtcctgatcctcggaagcaa
aaagagcttgttgagacttacaattttaacatgactgttggttcatctgaaaacatttca
agtagcgatggtggtcggtccaaaaacaaaaaaagttccaagaaaggtaaggagaagtgt
gaagcaaatgggttccataattcaaaggatgctttggcagatagtatcatcagcagtgtg
aagagtttccaatcaaattataagccttctgaagatgaggtggaggtcttatcaaaagat
gggtatcggtctaccaaaggcaaattaaaagcttctgtggatgatgaactgtccaactta
atttctacccatcactcaagaatggagccaaaatctgaaaatggatctcatttagcgggt
ggtggatcagcaaaaaatgtggagactgggggagtaggaaataagccaaagaaaaaaatt
tctaagttccttagaaaccgtctaggtaatgatgccacagaacttttagatcttggtgat
tctgatcctggtcctggtcagactgaagaaaaatcagatggaggtaaggagccgcctgga
gggtggccagttcgtggagtttggcaaaatggtggagggcggagacttgtgtcaattacc
cagagagaccccagaaagtga
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