Quercus lobata (valley oak): 115980035
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Entry
115980035 CDS
T07350
Name
(RefSeq) multisubstrate pseudouridine synthase 7 isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115980035
Enzymes [BR:
qlo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
115980035
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115980035
Prokaryotic type
115980035
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
115980035
NCBI-ProteinID:
XP_030958090
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Position
3:24864609..24878030
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AA seq
727 aa
AA seq
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MYLLNSFSALKPKLKPYFLCNSNFNSNYYPITTTKSSITQMATKVDESNVGIFCFISNLP
GFRGILKQRYSDFIVNEVDKEGNVAHLTSLDAPQEEIGEETVTMTEDTANTKSYASEIES
FRSLAGDSDAKHLEDFINQINSGVEDGISPIVLSPDSDKSHRTAMHNFFKQNFKFLVTDV
VDGPDASSKCIRVRLNTGGQRNKGRHSKKRKERGDKPFDSRGSENWSENNGKFLRFHLYK
ENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRAVTTQRVTAFKQHASRLAALNERLIGIK
VGDFCYVKEGLLLGQLMGNRFTITLRGVVADSDDTVKASADALGRLGFINYFGLQRFGSG
SVPTHLIGAALFRGEWKAAVSMILDPREGERTVIAKAREYYKESNDIEGTLKQLPRHLVA
ERAILQCLKKCPGNYLQALKAVPRTLRMMYIHSYQSYLWNHAASLRVQKYGTDQVVLGDL
VYCKGDNTENVSGGMLECEDDSNNDADDSNHLDEISGTDLPEERNNLVKVVTAEDIHTGN
YTIDDVVLPMPGSRVIYPSNDIANVFHDLAKKDAISLLESVHSVKEFSLTSITGSYRRVF
QKPLDFEWELLSYTDGNIPLVETDLEKIAKSKPVKKAREEDLANGNDKNNLFDCTKQSEI
LENDMKTETDDNEVEGEQEDVLPRVESQEPQMALKLSFTLPASCYATMAIRELLKTSTSV
AYHKTLN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtacttactaaattcattctctgctctgaaaccaaaactaaaaccctacttcctctgc
aactctaacttcaacagtaactactaccccatcacaaccacaaaatcctccataacccaa
atggcaaccaaggttgacgagtccaacgttggaatcttctgcttcatctctaacctccct
ggctttcgtggcattctcaaacaaaggtattccgattttattgtgaatgaagtagataaa
gaaggaaatgtagctcatctaacttccttggatgcccctcaggaggagattggtgaggaa
actgtgacgatgacagaagatacagctaatactaaaagttatgcttctgaaattgaatca
tttagatctctagctggtgactcggatgccaagcatttagaagattttattaatcaaatt
aattctggtgttgaagacggcatttcaccaattgttctttcaccagattctgacaaatct
catcgaacggcaatgcacaatttttttaagcagaacttcaaattccttgtcactgacgtg
gttgatggaccagatgcctcatcaaaatgcattcgtgtgaggttaaatactggaggtcaa
agaaataaaggcagacactccaaaaaacggaaagaaagaggtgataagccctttgatagc
agaggttcagaaaattggtcagagaacaatgggaagttccttaggtttcatctttacaag
gagaacaaggacacacaggaggccttaggagtgataggaaagatgcttggcatccagccg
aggtcttttgggtttgcgggtacgaaggataagcgcgcagtcacgactcaaagggtaaca
gctttcaagcagcatgcaagtagattagctgctcttaatgaaaggttgattggtatcaaa
gtgggtgacttttgctatgttaaggaaggacttcttcttggccagctcatgggaaaccgg
tttacaatcacattgcgaggagttgttgcagattctgatgatactgtcaaagcatctgca
gatgcattgggaaggcttgggtttatcaactactttggtttacaacgttttggaagcggt
tctgtgccgacacatcttattggggctgcattattccgaggagagtggaaggctgctgta
agcatgattcttgatccaagagaaggggaaagaactgtcatagcaaaggcacgcgaatat
tacaaggaaagtaatgatattgaagggaccttgaagcagttacctcgacacttagttgct
gaaagggctatactgcagtgcttgaagaaatgtccggggaactacttgcaggctctgaag
gctgtacctcggacgttgagaatgatgtatatacatagttaccaaagctatttgtggaac
catgcagctagtctgagagtgcaaaaatatggtactgaccaagttgtgttgggagacttg
gtatattgtaaaggagataatactgaaaatgtgtcaggagggatgcttgaatgtgaagat
gacagcaataatgatgcagatgattctaatcatctagatgaaatctctggaacggatctt
cctgaagaaagaaataatcttgtgaaggttgtaactgcagaagatatccatactggaaat
tatacaattgatgatgttgtcctcccaatgcctggttcaagggtaatatatccatctaat
gatattgccaatgtcttccatgatttggcaaagaaggatgcaatcagcttgttggagagt
gtacatagtgtaaaggaattctcattaaccagtataactggaagttataggcgggttttt
caaaagccacttgacttcgaatgggaattactctcatataccgatggtaatattccatta
gtagagacagatttagagaaaattgccaagtctaaacctgtgaagaaggccagagaagag
gatctggccaatggaaatgacaaaaacaatctgtttgattgcacaaaacaatcagagatt
cttgaaaatgacatgaagactgaaacagatgataatgaggtggagggtgagcaagaagat
gtcttgccaagagttgaatctcaggaaccccagatggctcttaagttaagctttaccctc
ccagcttcttgctatgcaacaatggcaataagagaacttcttaagacttcaacatctgtt
gcatatcataaaacattgaactag
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