Quercus lobata (valley oak): 115980105
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Entry
115980105 CDS
T07350
Name
(RefSeq) flowering locus K homology domain isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115980105
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115980105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
RemA-like
BMC
NIL
Motif
Other DBs
NCBI-GeneID:
115980105
NCBI-ProteinID:
XP_030958236
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All DBs
Position
3:27773448..27785096
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AA seq
482 aa
AA seq
DB search
MMFFEDFASTTLMAEVEVDHVFVEPDVDQVPEQVAEEVSDQLPDQIPDHVPENTEPEQKQ
GRDEDSVIGGGEKKWPGWPGESVFRMLVPAQKVGSIIGRRGEFIKKIVEETRARIKILDG
PPGTAERAVMVSAKEEPDSSLPPAMDGLLRVHKRIVDGLEGDSSHAPPGMGGKVSTRLLV
AASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDPAGVHKAVE
LIASHLRKFLVDRSIIPIFEMHMQMGNPQMEHMPPPQHQSWGPPQGVPPSGGGGPGYGPT
PQYMPPPRQLDNYYQPADLPPPMDKQPHHGISAYGREAPMGVHASSNAQTAPSMVTQVTQ
QMQIPLMYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQAAQQL
IQNFMVDAGAPPPQQAPAGGTTDQGYNSYPAHGSVYASPPSNPGHAGHAGGYGSVYGTNY
GY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttttgaggattttgcaagcactacacttatggctgaagttgaagttgatcat
gtctttgttgagcctgacgtagatcaagtacctgaacaagtagctgaagaagtatctgat
caattacctgatcaaatacctgatcacgtacctgaaaacacagagccggaacaaaaacaa
gggcgtgatgaggattctgtcattggaggtggtgaaaagaagtggcctggatggcctgga
gagagtgttttccggatgctggttcctgcacagaaggttggtagtataattggacgcaga
ggggagttcatcaaaaaaatagttgaggagacaagagctcgcataaaaattcttgatggt
cctccagggacagcagaaagagctgtaatggtatctgccaaggaggagcctgattcttct
ctccctcctgctatggatggccttctgagagttcacaaacgcattgtggatggtttggag
ggtgattcatctcatgctccaccaggaatgggaggcaaggtctctacaaggttgcttgtg
gctgcctctcaagctggaagtttgattggaaaacagggaggaactgttaaatccattcaa
gaggcatcaaactgtatcgttagagttcttggtgcagaggacctacctgtttttgctctt
caagatgatagagttgttgaagttgtaggggatccagcaggtgtgcacaaggctgtggaa
ctaattgcttcccatctcaggaagtttttagttgatcgaagtataattcctatatttgaa
atgcatatgcaaatggggaatcctcagatggagcacatgccaccaccacagcatcaatcg
tggggtccacctcaaggtgttcctccaagtggtggtggaggtcctggttatggacctact
cctcaatacatgccacctccacggcaacttgacaattactaccaacctgctgacttgccg
cctcccatggataaacagcctcatcatgggatatctgcctatggaagagaagctccaatg
ggtgtacatgcgtcatcaaatgcccaaacagcaccgtcaatggttacccaggtcacacag
caaatgcaaattccactaatgtatgctgatgctgttattgggacagctggtacgagtatc
agctacattcgacgagctagtggggcaactgttactatacaagaaactaggggtgttcct
ggtgaaatgacagttgaaatcagtggaactgcttcccaagttcaagctgctcagcagctg
atacagaattttatggttgatgctggggcaccaccgccgcaacaggcaccagcaggtggg
actactgaccaaggttacaattcatatccagctcatggctctgtttatgcgtctcctccc
tccaaccctggacatgcaggccacgctgggggttatggctcagtgtatggcacgaattat
gggtactaa
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